Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498715.1_202013-11-25] 239 sequences; 10,703,894 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 5e-14 >seq2 Length=333263 Score = 93.3 bits (102), Expect = 5e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| |||||| || ||||| | ||| |||||||||||||||| ||| Sbjct 298489 TCCTTCTGGATGGAGTAGTCCTGGAGGGTGCGATTGTCCTCGAGCTGCTTGCCGGAGAAG 298430 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||||||| || | ||| | | |||||||||| ||||||| ||||| | Sbjct 298429 ATGAGGCGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTGATGTTG 298370 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | || || | | || || || | |||| ||| ||||| || || || || || Sbjct 298369 TTTATGGTATCTGTGGGCTCAACCTCAAGGGTGACGGTCTTGCCGGTGAGAGTCTTGACG 298310 Query 46583 AAGATTTGCAT 46593 ||||| ||||| Sbjct 298309 AAGATCTGCAT 298299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565236711350280