Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498715.1_202013-11-25] 239 sequences; 10,703,894 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 6e-12 >seq2 Length=333263 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 || || || | ||| || | |||||||| ||||||| ||||| || ||| |||||| Sbjct 298528 TTACCACCACGGAGGCGGAGGACGAGGTGGAGCGTGGCATCCTTCTGGATGGAGTAGTCC 298469 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | |||| || ||| |||||||| ||||| | || || | ||||||||||| ||| Sbjct 298468 TGGAGGGTGCGATTGTCCTCGAGCTGCTTGCCGGAGAAGATGAGGCGCTGCTGATCTGGC 298409 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || || || || || || || || |||| || | || || | | || Sbjct 298408 GGGATTCCCTCCTTGTCCTGGATCTTCGCCTTGATGTTGTTTATGGTATCTGTGGGCTCA 298349 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || | ||| || ||||| | ||| || ||||| || ||||| Sbjct 298348 ACCTCAAGGGTGACGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 298299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505396890122280