Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498715.1_202013-11-25] 239 sequences; 10,703,894 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq2 143 3e-29 >seq2 Length=333263 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||||||||| | || |||||||||||| | Sbjct 298299 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCGTCACCCTTGAGGTTGAGCCCACA 298358 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| || | ||||| || || ||||||||||||||||| || ||||| ||| Sbjct 298359 GATACCATAAACAACATCAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAG 298418 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || | || ||||| |||||||| |||| ||||| ||||| Sbjct 298419 CAGCGCCTCATCTTCTCCGGCAAGCAGCTCGAGGACAATCGCACCCTCCAGGACTACTCC 298478 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||| || || || ||| | || || || ||||| Sbjct 298479 ATCCAGAAGGATGCCACGCTCCACCTCGTCCTCCGCCTCCGTGGTGG 298525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570308696197680