Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498715.1_202013-11-25] 239 sequences; 10,703,894 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq2 105 1e-17 >seq2 Length=333263 Score = 105 bits (116), Expect = 1e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || || || | |||| || || |||||| |||||| Sbjct 298526 ACCACCACGGAGGCGGAGGACGAGGTGGAGCGTGGCATCCTTCTGGATGGAGTAGTCCTG 298467 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| ||||| || || || |||| ||||| | || || || || ||| Sbjct 298466 GAGGGTGCGATTGTCCTCGAGCTGCTTGCCGGAGAAGATGAGGCGCTGCTGATCTGGCGG 298407 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| || || | | | | || || || | | || || Sbjct 298406 GATTCCCTCCTTGTCCTGGATCTTCGCCTTGATGTTGTTTATGGTATCTGTGGGCTCAAC 298347 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || |||| ||||| || || | |||||| ||||| |||||||| Sbjct 298346 CTCAAGGGTGACGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 298299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046735994688306