Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498715.1_202013-11-25] 239 sequences; 10,703,894 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 5e-13 >seq2 Length=333263 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || || || |||||| |||||||| ||| ||||| | Sbjct 298525 CCACCACGGAGGCGGAGGACGAGGTGGAGCGTGGCATCCTTCTGGATGGAGTAGTCCTGG 298466 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | ||| |||||||||||||||| ||| || |||||||| || || | || Sbjct 298465 AGGGTGCGATTGTCCTCGAGCTGCTTGCCGGAGAAGATGAGGCGCTGCTGATCTGGCGGG 298406 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | | |||||||||| ||| || ||| | | || || | | ||| ||| Sbjct 298405 ATTCCCTCCTTGTCCTGGATCTTCGCCTTGATGTTGTTTATGGTATCTGTGGGCTCAACC 298346 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || | || || || || || ||||| ||||| |||||||| Sbjct 298345 TCAAGGGTGACGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 298299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462302618866800