Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498735.1_202013-11-25] 543 sequences; 12,009,633 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq79 102 7e-17 >seq79 Length=51337 Score = 102 bits (112), Expect = 7e-17 Identities = 123/165 (75%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 118575 GTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATG 118634 ||||| | ||||||||||| || || | | ||||||| ||||||||||| || || || Sbjct 15836 GTGCGGTTGTCCTCGAGCTGCTTGCCGGAGAAGATGAGGCGCTGCTGATCTGGTGGGATT 15777 Query 118635 CCCTCCTTGT-CTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTC 118693 |||||||||| ||| | || || | |||| | ||| |||||| ||| ||||| Sbjct 15776 CCCTCCTTGTCCTGGATCTTCGCCTTGATGTTGTT-TATGGTATCCGTGGGCTCAACCTC 15718 Query 118694 GACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | ||| || || |||||||| ||||| || || || |||||||| Sbjct 15717 AAGGGTGACGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 15673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433827528991756