Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498735.1_202013-11-25] 543 sequences; 12,009,633 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq79 84.2 1e-11 >seq79 Length=51337 Score = 84.2 bits (92), Expect = 1e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 34229 CGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTC 34288 |||| ||| || | ||||||||| | ||| ||||| |||||||| || || | | | Sbjct 15833 CGGTTGTCCTCGAGCTGCTTGCCGGAGAAGATGAGGCGCTGCTGATCTGGTGGGATTCCC 15774 Query 34289 TCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACC 34348 |||||||| ||||| ||| | | | ||| | ||| || | || || || | Sbjct 15773 TCCTTGTCCTGGATCTTCGCCTTGATGTTGTTTATGGTATCCGTGGGCTCAACCTCAAGG 15714 Query 34349 GTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||| |||||||||||||| || || ||||||||||| Sbjct 15713 GTGACGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 15673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323069861970080