Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498735.1_202013-11-25] 543 sequences; 12,009,633 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq79 105 6e-18 >seq79 Length=51337 Score = 105 bits (116), Expect = 6e-18 Identities = 124/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | ||||| || || ||||| ||||| || || |||| Sbjct 15673 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCGTCACCCTTGAGGTTGAGCCCACG 15732 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | ||||| || || || ||||||||||| || ||||| ||||| Sbjct 15733 GATACCATAAACAACATCAAGGCGAAGATCCAGGACAAGGAGGGAATCCCACCAGATCAG 15792 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTC 22386 || || || || || ||||||| ||| | ||||| |||||||| || Sbjct 15793 CAGCGCCTCATCTTCTCCGGCAAGCAGCTCGAGGACAACCGCACCCTC 15840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419725222318795