Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498735.1_202013-11-25] 543 sequences; 12,009,633 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq79 98.7 9e-16 >seq79 Length=51337 Score = 98.7 bits (108), Expect = 9e-16 Identities = 117/156 (75%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || | | |||| | ||||||||||| || || || ||||||||| Sbjct 15827 TCCTCGAGCTGCTTGCCGGAGAAGATGAGGCGCTGCTGATCTGGTGGGATTCCCTCCTTG 15768 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| ||| ||||| |||||| | ||| ||||| ||| || || | ||| || Sbjct 15767 TCCTGGATCTTCGCCTTGATGTTGTT-TATGGTATCCGTGGGCTCAACCTCAAGGGTGAC 15709 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||||||| ||||| || || || |||||||| Sbjct 15708 GGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 15673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475497572538320