Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498735.1_202013-11-25] 543 sequences; 12,009,633 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq79 84.2 2e-11 >seq79 Length=51337 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||| || ||||| | ||| |||||||||||||||| ||| Sbjct 15863 TCCTTCTGGATGGAATAGTCCTGGAGGGTGCGGTTGTCCTCGAGCTGCTTGCCGGAGAAG 15804 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||||||| || | || | | |||||||||| ||||||| ||||| | Sbjct 15803 ATGAGGCGCTGCTGATCTGGTGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTGATGTTG 15744 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | || || | | || || || | |||| ||| ||||| || || || || || Sbjct 15743 TTTATGGTATCCGTGGGCTCAACCTCAAGGGTGACGGTCTTGCCGGTGAGAGTCTTGACG 15684 Query 46583 AAGATTTGCAT 46593 ||||| ||||| Sbjct 15683 AAGATCTGCAT 15673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565234563444360