Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498735.1_202013-11-25] 543 sequences; 12,009,633 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq79 87.8 4e-12 >seq79 Length=51337 Score = 87.8 bits (96), Expect = 4e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 194986 TCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTG 195045 || ||||||||||| || | |||||| || || || || ||||| || || || || ||| Sbjct 15827 TCCTCGAGCTGCTTGCCGGAGAAGATGAGGCGCTGCTGATCTGGTGGGATTCCCTCCTTG 15768 Query 195046 TCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACC 195105 || || || || ||||| ||| | ||||| |||| || || |||||||| || Sbjct 15767 TCCTGGATCTTCGCCTTGATGTTGTTTATGGTATCCGTGGGCTCAACCTCAAGGGTGACG 15708 Query 195106 GTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTTA 195143 ||||| || || | ||| || ||||| | ||||| || Sbjct 15707 GTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCATATA 15670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109473881128481