Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498735.1_202013-11-25] 543 sequences; 12,009,633 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq79 87.8 1e-12 >seq79 Length=51337 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||| ||||||| ||| | || | || || ||||| || |||| || Sbjct 15863 TCCTTCTGGATGGAATAGTCCTGGAGGGTGCGGTTGTCCTCGAGCTGCTTGCCGGAGAAG 15804 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| ||| | || | ||||||||||| |||||| |||| | Sbjct 15803 ATGAGGCGCTGCTGATCTGGTGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTGATGTTG 15744 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 ||| | || || |||||| || | ||| | ||| || || ||||||||||| || Sbjct 15743 TTTATGGTATCCGTGGGCTCAACCTCAAGGGTGACGGTCTTGCCGGTGAGAGTCTTGACG 15684 Query 34971 AAGATCTGCATAT 34983 ||||||||||||| Sbjct 15683 AAGATCTGCATAT 15671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324631451635704