Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498735.1_202013-11-25] 543 sequences; 12,009,633 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq6 91.5 2e-12 >seq6 Length=164938 Score = 91.5 bits (100), Expect = 2e-12 Identities = 93/121 (77%), Gaps = 3/121 (2%) Strand=Plus/Minus Query 1584224 CATGCGAAAGTAGCCGGCCTCGCCCCAGGCGACGCCCCACGAGTTGCGGATGATCCAAAA 1584283 |||||| ||||||||| ||||||||||| |||||| ||||||||||||||||| | Sbjct 129145 CATGCGGAAGTAGCCGTCCTCGCCCCAGCTAGGGCCCCAGGAGTTGCGGATGATCCAGTA 129086 Query 1584284 GGTCTCGCCCGAGTCGGGGTCCGTGCCCCAGCCGACAATGACGATGGCGTGGCCGCCGTC 1584343 | ||| | ||| |||||||| ||||||| || ||| |||||||||||| || Sbjct 129085 G---TCGACACCATCGTCATCCGTGCCATAGCCGACCATCTCGACGGCGTGGCCGCCCTC 129029 Query 1584344 C 1584344 | Sbjct 129028 C 129028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916188638613377