Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498735.1_202013-11-25] 543 sequences; 12,009,633 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq79 125 2e-23 >seq79 Length=51337 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || |||| || || |||||| ||| ||| ||||| | || Sbjct 15884 AGGACGAGGTGGAGCGTGGCATCCTTCTGGATGGAATAGTCCTGGAGGGTGCGGTTGTCC 15825 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| | |||||| ||||| || || || || || | ||| ||||||||| Sbjct 15824 TCGAGCTGCTTGCCGGAGAAGATGAGGCGCTGCTGATCTGGTGGGATTCCCTCCTTGTCC 15765 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || | ||| | ||||| || | | |||||||| || |||| ||| Sbjct 15764 TGGATCTTCGCCTTGATGTTGTTTATGGTATCCGTGGGCTCAACCTCAAGGGTGACGGTC 15705 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||||||||| || || | |||||| Sbjct 15704 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 15673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159143935562195