Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498735.1_202013-11-25] 543 sequences; 12,009,633 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq79 102 6e-17 >seq79 Length=51337 Score = 102 bits (112), Expect = 6e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| |||||| ||||| |||||| || || ||| ||| | ||| || Sbjct 15881 ACGAGGTGGAGCGTGGCATCCTTCTGGATGGAATAGTCCTGGAGGGTGCGGTTGTCCTCG 15822 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| |||| ||||| | ||||||||||||| || | || ||||| ||| Sbjct 15821 AGCTGCTTGCCGGAGAAGATGAGGCGCTGCTGATCTGGTGGGATTCCCTCCTTGTCCTGG 15762 Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| || | ||||| |||||| || | || || ||||| | || | ||||| Sbjct 15761 ATCTTC-GCCTTGATGTTGTTTATGGTATCCGTGGGCTCAACCTCAAGGGTGACGGTCTT 15703 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||| |||||||| ||||| Sbjct 15702 GCCGGTGAGAGTCTTGACGAAGATCTGCAT 15673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359988017651031