Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq708 84.2 2e-11 >seq708 Length=363590 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 19002 CAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATG 19061 ||||| || || |||||||| || |||| || ||| | ||||| | || | || ||| Sbjct 200732 CAGTTCTATGTCGCAAACGGCGAGCTATCATGTCAAATGTACCAACGCTCCTGCGACATG 200791 Query 19062 GGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCAT 19121 || ||||||||||||||||| || || ||| | || || || | || | || | Sbjct 200792 GGACTTGGGGTACCGTTCAATATAGCATCTTATTCGCTGCTAACATGTCTAATCGCCAAG 200851 Query 19122 GTTACAGGACTTAAAACCGGAGATTTAATTCATACAATGGGGGATGCACATATTTACTTG 19181 || ||||| || ||| ||||||| || | ||| ||||||| ||||| | ||| Sbjct 200852 GTGACAGGGCTCAAACCCGGAGACTTTGTCCATGTGTTGGGGGACACACATGTGTACAAC 200911 Query 19182 AATCATATAGATGC 19195 ||||| || || || Sbjct 200912 AATCACATTGAGGC 200925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399498532163535