Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq708 89.7 4e-13 seq191 87.8 1e-12 >seq708 Length=363590 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 97401 ATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTC 97460 ||| || || ||||| || | |||||| |||||||| ||||| ||||||||||| ||||| Sbjct 200572 ATACTCCGCGCCAAAGTGTCGCCATTGAAATCCATACACAGGACCAAGGTCTCCCTCTTC 200513 Query 97461 TCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTG 97520 | ||| ||||| | || ||| || | ||||||||| | |||||||| | Sbjct 200512 CCGATC-TGTAAACCCCGAGAGTCCAAAAAGCTTTTTGATCCATTTCCTTCCCAAATTCG 200454 Query 97521 CACACCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTC 97580 || || ||| ||| |||| ||||| ||| | |||||||| || | || Sbjct 200453 GACCCCCTTCTCTGTCAGCAGTTTGGCATCAGTGCTTCCCTTAATAAACCAAAAAAGCTC 200394 Query 97581 TTCCACAACACCTCTCCAAAATACTCTCTTAGTTGT 97616 ||| ||||||| | |||||| |||| ||| || || Sbjct 200393 CTCCGCAACACC-CGCCAAAACACTCGCTTGGTCGT 200359 >seq191 Length=259989 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 97401 ATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTC 97460 ||| || || ||||| || | |||||| |||||||| || || ||||||||||| ||||| Sbjct 120957 ATACTCCGCGCCAAAGTGTCGCCATTGAAATCCATACACGGGACCAAGGTCTCCCTCTTC 121016 Query 97461 TCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTG 97520 | ||| || || | || ||| || | ||||||||| | |||||||| | Sbjct 121017 CCGATCTGTAAACCCCCGAGAGTCCAAAAAGCTTTTTGATCCATTTCCTTCCCAAATTCG 121076 Query 97521 CACACCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTC 97580 || || ||| ||| |||| ||||| ||| | |||||||| || | || Sbjct 121077 GACCCCCTTCTCTGTCAGCAATTTGGCATCAGTGCTTCCCTTAATAAACCAAAAAAGCTC 121136 Query 97581 TTCCACAACACCTCTCCAAAATACTCTCTTAGTTGT 97616 ||| ||||||| | |||||| |||| ||| || || Sbjct 121137 CTCCGCAACACCCCGCCAAAACACTCGCTTGGTCGT 121172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346779253719110