Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_003324.1 Length=57416 Score E Sequences producing significant alignments: (Bits) Value seq266 100 1e-16 >seq266 Length=77092 Score = 100 bits (110), Expect = 1e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 48642 AAGAAGCCGAACCCAATCGACACGCAGGTCGGCGCCCGCATCCGGCTCCGCCGCAACATC 48701 ||| | || ||||| || || | || || ||| |||| | || || || | | || Sbjct 23644 AAGCAACCAAACCCGATTGATATTCACGTAGGCAGCCGCGTGCGCCTGCGGAGGATGATG 23703 Query 48702 ATCGGCATGAGCCAGGAGACGCTGGCTGCGCATCTCGGCATCACCTTCCAGCAGGTCCAG 48761 | ||||| |||||||||| ||| | | |||||||||||||| |||||||| ||||| Sbjct 23704 ACGGGCATTAGCCAGGAGAAGCTTGGAGAACATCTCGGCATCACATTCCAGCAAATCCAG 23763 Query 48762 AAATACGAAAAGGGCGCCAACCGCGTCGGCGCCAG 48796 ||||||||||| ||| | ||||| | |||||||| Sbjct 23764 AAATACGAAAAAGGCACAAACCGTATTGGCGCCAG 23798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 183607151451228