Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq475 96.9 2e-15 >seq475 Length=1546706 Score = 96.9 bits (106), Expect = 2e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTC 43971 ||||||||| || || ||| ||||| || |||||||| || || || || || Sbjct 934411 CACCAAATGGAGGGTTGACTCCTTTTGGATGTTATAATCCGACAAGGTTCGGTCGTCCTC 934470 Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031 |||||| ||||| ||||| |||| || || ||||||||||| | || || || ||| Sbjct 934471 CAATTGCTTTCCGGCAAAAATCAGACGCTGTTGGTCCTGAGGAATGCCCTCCTTGTCTTG 934530 Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091 || ||| ||||| | ||||| | || | || || || || | || || || || Sbjct 934531 GATCTTTGACTTGACATTTGCAACGTTGTCCGACGATTCTACCTCAAGGGTGATGGTCTT 934590 Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 ||||||| |||||| || || || |||||| Sbjct 934591 CCCGGTTAGAGTCTTGACGAAAATCTGCATG 934621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354772744314204