Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq328 98.7 1e-15 >seq328 Length=32153 Score = 98.7 bits (108), Expect = 1e-15 Identities = 194/283 (69%), Gaps = 3/283 (1%) Strand=Plus/Plus Query 6952 GCCGCCGCAGTCCAAGGACATAGCGAGAACCGAATCACCCGGCTTCAGGAGTGCTTGGTA 7011 ||| ||||| || | | ||| |||||| | ||||||||||||| || || || | Sbjct 21810 GCCCCCGCA-TCAAGGCTCATGCCGAGAATGGTGTCACCCGGCTTCAACAGCGCCTGAAA 21868 Query 7012 AACTGCCTGGTTTGCTTGTGAACCGGAATGAGGTTGAACGTTTGCGAAATTGCAACTAAA 7071 || |||| || || || || |||| ||||| ||||| || || |||| | || Sbjct 21869 GACGCCCTGATTGGCCTGGCTGCCTGAATTGGGTTGTACGTTCGCAAACCCGCAATTGAA 21928 Query 7072 CAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATTTCATCGGCTTTTACGCAGCCGCC 7131 ||| |||| || || ||| ||||| | ||||| |||| | | |||| ||||| Sbjct 21929 CAGCGCTTTGGCCCGGTCACGCGCCAGATCCTCGACAATATCGACATACTCGCAACCGCC 21988 Query 7132 ATAATACCGTTTGCCCGGATATCCCTCAGCATACTTGTTGGTAAAAATAGAACCCTGTGC 7191 |||||| || ||| ||||| || || ||||| |||||||| | | | || || || Sbjct 21989 ATAATAGCGCCGGCCGGGATAGCCTTCTGCATATTTGTTGGTCAGCACCGTGCCTTGCGC 22048 Query 7192 TTTCATAACATCGTCTGACAC-ATAGTTTTCGGACGCAATCAA 7233 | ||| || | | ||||| ||| || || ||||||||||| Sbjct 22049 CTCCATCACGGCCTGGGACACGATA-TTCTCAGACGCAATCAA 22090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555355404089080