Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq560 93.3 4e-14 >seq560 Length=1805984 Score = 93.3 bits (102), Expect = 4e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 5638 GCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGC 5697 |||||| || |||| || || |||| | ||||| || || || || | || || || Sbjct 360066 GCCGAAATTAAACAAAACAACACCCAACTCACCGCGATAATCCGCATCGACAACACCAGC 360125 Query 5698 GCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAGCA 5757 |||||| ||||| || | |||||| |||| ||| ||||| || |||||||||||||| || Sbjct 360126 GCCCACATCGATAAACTTCTTGACAGCCAAGCCCGAGCGCGGGGCCACGCGGCCGTAACA 360185 Query 5758 CCCATCGGGAA 5768 || | ||||| Sbjct 360186 ACCGTGGGGAA 360196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430048514033576