Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_005856.1 Length=94800 Score E Sequences producing significant alignments: (Bits) Value seq237 134 8e-27 >seq237 Length=100024 Score = 134 bits (148), Expect = 8e-27 Identities = 189/260 (73%), Gaps = 9/260 (3%) Strand=Plus/Plus Query 72333 TCTCGCTCA-CTGAAGGCGTTGGCGAAGGAATTACAAGTACCGGTGGTGGCATTGTCACA 72391 |||||| | |||||||| ||||||||||| | | || || |||||||| | || || Sbjct 80236 TCTCGCGCGGCTGAAGGCTTTGGCGAAGGAGCTCAATGTGCCCGTGGTGGCGCTATCTCA 80295 Query 72392 ACTTAATCGATCGCTT-GAACAGCGTGCGGACAAACGACCGGTAAATTCAGATTTACGTG 72450 || ||||| || ||| || || || || |||||||| | |||||||| | Sbjct 80296 GCTCAATCGTTCACTTCGAGCAACGGCAAGATAAACGACCTCTGCTGAGCGATTTACGGG 80355 Query 72451 AATCAGGAGCAATTGAGCAGGACGCAGACCTGATTATGTTTCTGTATCGCGACGAAGTTT 72510 | ||||| || |||||||||||||| |||||||| |||||| | ||||||||||| || Sbjct 80356 AGTCAGGGGCGATTGAGCAGGACGCCGACCTGATCATGTTTGTCTATCGCGACGA---TT 80412 Query 72511 ATCAC---CCGGATAGCGAAATGAAGGGCATTGCCGAGGTAATTATCGGAAAGCAACGAA 72567 || || ||||||| || | || ||| || | || | || | |||||||| |||| Sbjct 80413 ATTACAGTCCGGATA-CGCAGAAAAAGGCGTTACGGAAATCATCGTTGGAAAGCAGCGAA 80471 Query 72568 ATGGCCCAATTGGCACGGTG 72587 ||||||| | ||||| ||| Sbjct 80472 ATGGCCCGGTAGGCACCGTG 80491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 303231049752483