Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq432 84.2 3e-11 seq394 84.2 3e-11 >seq432 Length=1013568 Score = 84.2 bits (92), Expect = 3e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 19424 CAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTAACCCACAT 19483 || ||||||||||| ||| | | | ||||| ||||||||||| ||||| ||||||||| Sbjct 740884 CAGGAAGATATGCCGTTTTCGGACAAGGGTATTGTGCCGGATCTGATTATGAACCCACAT 740825 Query 19484 GCTTTTCCAAGTCGAATGACG 19504 | ||||| |||||||||||| Sbjct 740824 GGATTTCCGAGTCGAATGACG 740804 >seq394 Length=586667 Score = 84.2 bits (92), Expect = 3e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 19424 CAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTAACCCACAT 19483 || ||||||||||| ||| | | | ||||| ||||||||||| ||||| ||||||||| Sbjct 515158 CAGGAAGATATGCCGTTTTCGGACAAGGGTATTGTGCCGGATCTGATTATGAACCCACAT 515217 Query 19484 GCTTTTCCAAGTCGAATGACG 19504 | ||||| |||||||||||| Sbjct 515218 GGATTTCCGAGTCGAATGACG 515238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595863635446800