Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_007497.1 Length=44856 Score E Sequences producing significant alignments: (Bits) Value seq343 98.7 3e-16 >seq343 Length=35946 Score = 98.7 bits (108), Expect = 3e-16 Identities = 208/303 (69%), Gaps = 13/303 (4%) Strand=Plus/Plus Query 39258 GCAGGCCGCCGCCGACGCGCTTCGTCGTGTAGAACAGTACGTACGGCTTCGCCGTGTACG 39317 ||| |||||| || || || || ||||||||||||| ||| | ||||| |||| ||| Sbjct 28502 GCACGCCGCCACCCACACGTTTGGTCGTGTAGAACAAGACGAAAGGCTTGGCCGAAAACG 28561 Query 39318 GATCGCGCAGCACGCGAACCCCGATGCGGTCGATGATCAGATACGTCTGC--TGGAAGTC 39375 | || ||||| || || |||| ||||| | |||||||| || || | ||| || Sbjct 28562 GGTCCCGCAGGACACGTGTGCCGACCCGGTCCACAATCAGATA--TCCGCGTTTGAAATC 28619 Query 39376 GCCGAAGAGAATCGGCGTCGAGTTCGCCGCC-ACATCCGGCATGTCCGGCACCTCGGTAA 39434 ||| ||| ||| |||| | | || |||| | ||||||||||| | ||| || | Sbjct 28620 GCCAAAGGCAAT-GGCGGCCTGCCCGGCGCCAATGTCCGGCATGTCTTCAATCTCCGTCA 28678 Query 39435 CCGGATAGCCCGCCAGCGTCGCCGGCTGCCCCGCTACGTACGACGGTTGCCAGAGATAGT 39494 | |||||||| || ||||| | | ||| || | ||| ||||| ||||| Sbjct 28679 CGGGATAGCCGAGCACGGTCGCAGCATCTCCC---CCGGAGCCCGGCTGCCACAGATACC 28735 Query 39495 TCCCTTGGCCGTCCTTCAGCTTCCGCACCT--GACGCTGCGTGTTGCGGTTCATCGCGAA 39552 ||| | | ||||||||||| ||||||| ||| | |||| ||||||||| | || Sbjct 28736 GCCCGTCGGTATCCTTCAGCTTACGCACCTCGGACAC--CGTGCGCCGGTTCATCACAAA 28793 Query 39553 GCG 39555 || Sbjct 28794 CCG 28796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143415687436668