Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq864 241 2e-58 seq932 237 2e-57 >seq864 Length=1598700 Score = 241 bits (266), Expect = 2e-58 Identities = 628/964 (65%), Gaps = 2/964 (0%) Strand=Plus/Plus Query 62732 ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA 62791 ||||| |||| | ||||| || |||| || || ||||| ||||||| | | Sbjct 469113 ACAAATTTGTTGAGTGCAATGGAGGCCAANTTGCACACGGCAACCTCATCGGGTGAGGTG 469172 Query 62792 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 62851 |||| || |||||||| || | ||| || ||||| || | || || || || Sbjct 469173 TATTCAATAATCTCAGTACACAAATTNGAGCAACGAATGGTACCGAGGTTCTGCTGGTTG 469232 Query 62852 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGAT 62911 ||||| ||||||| | ||||||||| || ||| |||| || || || |||||||| | Sbjct 469233 CTCTTCCTGTTACAGGAATCCTTATANAGCATGTATGGGGTTCCGGTCTCAATCTGCGCC 469292 Query 62912 TCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT 62971 || | ||| || | ||| || || || | || | | | || | || | | Sbjct 469293 TCCAAAATAGCGTACCAAACCTTNCGCGCNTCAATCTTNGCCCTTGCTCGCCCTTGTTTC 469352 Query 62972 TCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACAT 63031 |||||| | || | || || ||| | || |||||| |||| || || Sbjct 469353 TCGTATTTCATGTANAGCTCCTCAAATTCGNCACCATAAACATCAGCCAGACCGGGTGCC 469412 Query 63032 TCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCA 63091 |||| |||||| | | ||||| | | |||| || | ||||||||| | ||| Sbjct 469413 TCATTCGGACAGAAGAGGGACCATGAANCATTTTCCTCNACCCTTTTCATAAACAAATCN 469472 Query 63092 GGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT 63150 |||||||| || | ||| || ||||| || | | || || || || || |||||| Sbjct 469473 GGAATCCAGAGNCC-ATAGAAGAGATCCCTTGCACGCTGCTCTTCCTTGCCATGATTCTT 469531 Query 63151 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAAC 63210 | || || || | | ||| || | |||||| || |||||||| || || | | Sbjct 469532 CCNCAAGTCTAGNAAATCGAGAATGTCTGCATGCCAGGGCTCCAAGTAGATTGCAAAGGC 469591 Query 63211 TCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAA 63270 || || || || |||||||| | || || ||||||| ||| || || || | Sbjct 469592 GCCCTTACGCTTCCCGCCGCCCTGATCAACATACCTGGCGGTGTCATTGTACACCCTNAG 469651 Query 63271 CATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACG 63330 ||| || | ||| |||||||| ||||||||||| ||| |||||| | | || | | Sbjct 469652 CATNGGGACAATTCCATTGGAAGTACCATTGGTGCCTCGAATATAGGACCGAGTGCCCCT 469711 Query 63331 AATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTT 63390 || || | | || || || || || || || || || | || || || || Sbjct 469712 GATGTTGTGGACGGCGAGGCCGATACCGCCGGCAGACTTTGAAATGACGGCACANCGNTT 469771 Query 63391 TAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGA 63450 | || || || ||||| || ||| |||||| |||| | |||| ||| || || || Sbjct 469772 CANNGTGTCGTAAATGCCTTCGATAGAATCATCAGTCATAGTGAGTAAAAAGCAACTNGA 469831 Query 63451 CATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTT 63510 || || |||||| || |||||||| || || ||||| || || || || || || Sbjct 469832 CAGCTGAGGACGACAGGTACCCGCATTGAACAAAGTAGGNGANGCATGTGTGAAGAGCTT 469891 Query 63511 TTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTAC 63570 || || | ||| || | | | | || || || | ||||||| || || Sbjct 469892 NCGTGAGAGAGCGTCGTAGGTGTTGAGAATGGCCTCCATGTCACCGAGATGAATGCCAAC 469951 Query 63571 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAA 63630 | || | ||| | ||| ||||| || | ||||| ||||| |||| ||| ||| ||| Sbjct 469952 CGAAACCCTCATNAGCATATGCTGCGGACGCTCAACAATCTTATTGTCAATTCTCAGCAA 470011 Query 63631 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 63690 |||||| |||||||||| ||||| || ||||| | ||| |||||||| || |||||||| Sbjct 470012 GTAGGACCTTTCCAAAGTCTTAAANCCNAAATAATCGTACGAAAAGTCACGATCGTAAAT 470071 Query 63691 AATA 63694 ||| Sbjct 470072 GATA 470075 >seq932 Length=795108 Score = 237 bits (262), Expect = 2e-57 Identities = 635/964 (66%), Gaps = 5/964 (1%) Strand=Plus/Minus Query 62732 ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA 62791 ||||| |||| | ||||| || |||| ||| || ||||| ||||||| | | Sbjct 206636 ACAAATTTGTTGAGTGCAATGGAGGCCAAATTGCACACGGCAACCTCATCGGGTGAGGTG 206577 Query 62792 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 62851 |||| || |||||||| || | ||| || ||||| || | || || || || Sbjct 206576 TATTCAATAATCTCAGTACACAAATTTGAGCAACGAATGGTACCGAGGTTCTGCTGGTTG 206517 Query 62852 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGAT 62911 ||||| ||||||| | ||||||||| || ||| |||| || || || |||||||| | Sbjct 206516 CTCTTCCTGTTACAGGAATCCTTATAGAGCATGTATGGGGTTCCGGTCTCAATCTGCGCC 206457 Query 62912 TCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT 62971 || | ||| || | ||| || ||| || | || | | | || | || | | Sbjct 206456 TCCAAAATAGCGTACCAAACCTTTCGCGCATCAATCTTTGCCCTTGCTCGCCCTTGTTTC 206397 Query 62972 TCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACAT 63031 |||||| | || | || || ||||| || |||||| |||| || || Sbjct 206396 TCGTATTTCATGTAGAGCTCCTCAAATTCGTCACCATAAACATCAGCCAGACCGGGTGCC 206337 Query 63032 TCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCA 63091 |||| |||||| | | ||||| | | |||| || | ||||||||| | ||| Sbjct 206336 TCATTCGGACAGAAGAGGGACCATGAAGCATTTTCCTCGACCCTTTTCATAAACAAATCT 206277 Query 63092 GGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTT 63150 |||||||| || | ||| || ||||| || | | || || || || || |||||| Sbjct 206276 GGAATCCAGAGTCC-ATAGAAGAGATCCCTTGCACGCTGCTC-TCCTTGCCATGATTCTT 206219 Query 63151 TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAAC 63210 | || ||||| | | ||| || | |||||| || |||||||| || || | | Sbjct 206218 CCGCAAGTCTAGGAAATCGAGAATGTCTGCATGCCAGGGCTCCAAGTAGATTGCAAAGGC 206159 Query 63211 TCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAA 63270 || || || || |||||||| | || || ||||||| ||| || || || | Sbjct 206158 GCCCTTACGCTTCCCGCCGCCCTGATCAACATACCTGGCGGTGTCATTGTACACCCTGAG 206099 Query 63271 CATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACG 63330 ||| || | ||| |||||||| ||||||||||| ||| |||||| | | || | | Sbjct 206098 CATAGGGACAATTCCATTGGAAGTACCATTGGTGCCTCGAATATAGGACCGAGTGCCCCT 206039 Query 63331 AATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTT 63390 || || | | || || || || || || || || || | || || || || Sbjct 206038 GATGTTGTGGACGGCGAGGCCGATACCGCCGGCAGACTTTGAAATGACGGCACAACG-TT 205980 Query 63391 TAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGA 63450 | | || || || ||||| || ||| |||||| |||| | |||| ||| || || || Sbjct 205979 TCAGGTGTCGTAAATGCCTTCGATAGAATCATCAGTCATAGTGAGTAAAAAGCAACT-GA 205921 Query 63451 CATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTT 63510 || || |||||| || |||||||| || || ||||| ||||| || || || || Sbjct 205920 CAGCTGAGGACGACAGGTACCCGCATTGAACAAAGTAGGTGAAGCATGTGTGAAGAGCTT 205861 Query 63511 TTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTAC 63570 || || | ||| || | | | | || || || | ||||||| || || Sbjct 205860 GCGTGAGAGAGCGTCGTAGGTGTTGAGAATGGCCTCCATGTCACCGAGATGAATGCCAAC 205801 Query 63571 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAA 63630 | || | ||| | ||| ||||| || | ||||| ||||| |||| ||| ||| ||| Sbjct 205800 CGAAACCCTCATAAGCATATGCTGCGGACGCTCAACAATCTTATTGTCAATTCTCAGCAA 205741 Query 63631 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 63690 |||||| |||||||||| ||||| |||||||| | ||| |||||||| || |||||||| Sbjct 205740 GTAGGACCTTTCCAAAGTCTTAAACCCAAAATAATCGTACGAAAAGTCACGATCGTAAAT 205681 Query 63691 AATA 63694 ||| Sbjct 205680 GATA 205677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633623105390800