Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_009603.1 Length=46365 Score E Sequences producing significant alignments: (Bits) Value seq355 149 2e-31 >seq355 Length=29752 Score = 149 bits (164), Expect = 2e-31 Identities = 239/338 (71%), Gaps = 4/338 (1%) Strand=Plus/Minus Query 42652 GCCCACCGCCAGGGCGTTGACCAGCGGATTGGCCTGATAGACGGCATCGAACACGGTCTC 42711 ||| ||||||| ||||| || || ||| | | |||| | ||||||| |||||| Sbjct 14099 GCCAACCGCCATCGCGTTTACGAGGATGTTGCCATTATAGCCCTTATCGAACTGGGTCTC 14040 Query 42712 GCCGCCGATGTTCGGCAGACCGAGGCAGTTGCCGTAGAAGCTGATGCCGCTGGTGACGCC 42771 ||| | | | |||| | || | ||||| |||||| || ||||| ||||| Sbjct 14039 TCCGGCAACGGTCGGTACGCCAACACAGTTTCCGTAGCCGCCAATGCCCGCCACAACGCC 13980 Query 42772 GTGC-ACGACC-CGCGCCGTGTCGGGGTCGTCGGCCGCGCCGAAGCGCAGGGCGTCCATG 42829 ||| || | | ||||| || | || | ||| | | | |||||||| || |||| | | Sbjct 13979 -TGCGACCAGCTCGCGC-GTCTTCGGATGGTCCGGCTCCCCGAAGCGTAGCGCGTTGACG 13922 Query 42830 ACCGCGACCGGGCGAGCGCCCATGGAGATGATGTCGCGGACGATGCCGCCCACACCCGTC 42889 | ||| | || || |||||||||| || || ||||| | ||||||||||||||| ||| Sbjct 13921 AGCGCAATGGGCCGCGCGCCCATGGTGAAGACATCGCGCAGGATGCCGCCCACACCGGTC 13862 Query 42890 GCCGCGCCCTGGAAGGGCTCGATGAACGAGGGGTGGTTGTGACTCTCCGCCTTGAACGTG 42949 |||||||| || | |||||||| | |||||||||||||| |||||| ||||| | Sbjct 13861 GCCGCGCCTTGATACGGCTCGATATAGGAGGGGTGGTTGTGGCTCTCCATTTTGAAGATC 13802 Query 42950 ACCGCCCATCCCTCGCCGACGTCGATGACGCCCGCGTT 42987 | ||| || ||||| | ||||||||| || || || Sbjct 13801 GCGGCCTGCCCATCGCCAATGTCGATGACACCTGCATT 13764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148244423041602