Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq237 113 1e-20 >seq237 Length=100024 Score = 113 bits (124), Expect = 1e-20 Identities = 238/349 (68%), Gaps = 12/349 (3%) Strand=Plus/Plus Query 8773 GGGATGATTGTCGTTGACTACCTGCAGCTGATGTCGGGTGACGGCGGCGGATCTGAAATG 8832 |||||| | || || || || || ||||||||| || | || ||||| ||| | Sbjct 80157 GGGATGGTCGTTGTGGATTATCTTCAGCTGATGCGAGG---CCGCAGCGGAAGCGAAGGG 80213 Query 8833 CGGGCCACCGAGGTCGCCGAAATATCGCGCGCACTCAAACAAATTGCGAAGGAACTCGAC 8892 || | | ||| || | || || ||||||| || || | |||||||| ||| | Sbjct 80214 CGAGAGAAGGAGATCTCGGAGATCTCGCGCGG-CTGAAGGCTTTGGCGAAGGAGCTCAAT 80272 Query 8893 GTTCCGATCATCGCGCTGTCGCAGCTTAATCGAGGGCT-CGAGAATCGCCCAAACAAGCG 8951 || || | | ||||| || ||||| ||||| || |||| | || | | | || || Sbjct 80273 GTGCCCGTGGTGGCGCTATCTCAGCTCAATCGTTCACTTCGAGCAACGGCAAGATAAACG 80332 Query 8952 GCCCGTCATGTCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGATGCCGACGTGATCCT 9011 || | || |||| | || ||||| || ||||| |||||||| |||||| ||||| | Sbjct 80333 ACCTCTGCTGAGCGATTTACGGGAGTCAGGGGCGATTGAGCAGGACGCCGACCTGATCAT 80392 Query 9012 CTTTATCTACCGCGATGAGGTCTATAACCCCGACAGCGCAGATC---GCGGTACGGCCGA 9068 ||| |||| ||||| || || | || || | |||||| ||| ||||| | Sbjct 80393 GTTTGTCTATCGCGACGATTATTACAGTCCGGATA-CGCAGAAAAAGGCGTTACGG---A 80448 Query 9069 AATCATCATTGCGAAGCAGCGAAACGGGCCGATTGGCACCGTACGGCTC 9117 ||||||| ||| ||||||||||| || ||| | |||||||| | |||| Sbjct 80449 AATCATCGTTGGAAAGCAGCGAAATGGCCCGGTAGGCACCGTGCAGCTC 80497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127543899099708