Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq191 96.9 6e-15 seq708 95.1 2e-14 >seq191 Length=259989 Score = 96.9 bits (106), Expect = 6e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 115638 TTCCCTCTCTTCACTACCAAACGCGTGTTTTGGAGGGCGGTGGCCGAGGAACTTATCTGG 115697 ||||| || |||| ||||| || ||||||||| ||| || || ||||| ||| | ||| Sbjct 121184 TTCCCGCTTCTCACGACCAAGCGAGTGTTTTGGCGGGGTGTTGCGGAGGAGCTTTTTTGG 121125 Query 115698 TTCCTTAAAGGTTGCACAGACGGCGTTAAGCTTGCGGAGAAGGGTGTCAACATTTGGCGA 115757 || |||| || |||| || | | ||| | |||||||| ||| |||||| | Sbjct 121124 TTTATTAAGGGAAGCACTGATGCCAAATTGCTGACAGAGAAGGGGGTCCGAATTTGGGAA 121065 Query 115758 GATAATGGAACTAGGTCCTTCTTGGACTCCAGAGGTCTCACAGATCACAGAGAACACGAT 115817 | |||||| | | ||| |||||||| | || | ||||||| ||| || Sbjct 121064 GGAAATGGATCAAAAAGCTTTTTGGACTCTCGGGGGTTTACAGATCGGGAAGAGGGAGAC 121005 Query 115818 CTGGGGCCGGTGTACGGATTTCAATGGCGGCACTGGGGCGC 115858 || || || ||||| |||||||||||||| |||| ||||| Sbjct 121004 CTTGGTCCCGTGTATGGATTTCAATGGCGACACTTTGGCGC 120964 >seq708 Length=363590 Score = 95.1 bits (104), Expect = 2e-14 Identities = 155/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 115638 TTCCCTCTCTTCACTACCAAACGCGTGTTTTGGAGGGCGGTGGCCGAGGAACTTATCTGG 115697 ||||| || |||| ||||| || ||||||||| ||| | || | ||||| ||| | ||| Sbjct 200347 TTCCCGCTTCTCACGACCAAGCGAGTGTTTTGGCGGGTGTTG-CGGAGGAGCTTTTTTGG 200405 Query 115698 TTCCTTAAAGGTTGCACAGACGGCGTTAAGCTTGCGGAGAAGGGTGTCAACATTTGGCGA 115757 || |||| || |||| || | | ||| | |||||||| ||| |||||| | Sbjct 200406 TTTATTAAGGGAAGCACTGATGCCAAACTGCTGACAGAGAAGGGGGTCCGAATTTGGGAA 200465 Query 115758 GATAATGGAACTAGGTCCTTCTTGGACTCCAGAGGTCTCACAGATCACAGAGAACACGAT 115817 | |||||| | | ||| |||||||| | ||| | ||||||| ||| || Sbjct 200466 GGAAATGGATCAAAAAGCTTTTTGGACTCTCGGGGTTT-ACAGATCGGGAAGAGGGAGAC 200524 Query 115818 CTGGGGCCGGTGTACGGATTTCAATGGCGGCACTGGGGCGC 115858 || || || ||||| |||||||||||||| |||| ||||| Sbjct 200525 CTTGGTCCTGTGTATGGATTTCAATGGCGACACTTTGGCGC 200565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795144038008880