Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq33 161 1e-34 seq932 152 6e-32 seq864 143 3e-29 seq827 143 3e-29 seq251 122 1e-22 seq523 104 3e-17 seq391 104 3e-17 seq317 96.9 4e-15 >seq33 Length=841369 Score = 161 bits (178), Expect = 1e-34 Identities = 330/483 (68%), Gaps = 17/483 (4%) Strand=Plus/Minus Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944 ||||| ||||||||||| || || | || | ||||| | ||| | || || || || Sbjct 175088 CGATCGAAGCGACCTGGACGCAGCAAAGCCTGGTCAAGAACATCCGCACGGTTTGTGGCA 175029 Query 15945 GCGATGACAACAATACCTGTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTA 16004 || ||||||| | ||| | | | ||||| || |||||||| ||||| | ||||| Sbjct 175028 GCTATGACAATGACACCAGAGTTGCCTTCAAACCCGTCCATCTCAGTCAACATTTGGTTC 174969 Query 16005 ATAGTTTGTTCCCGTTCATCATT--CGCTGGCATACCACCAGCACTGCGTTGCTTTCCCA 16062 | ||| ||||| || |||||||| | | || | ||||||| | ||| ||| | Sbjct 174968 AGAGTCTGTTCACGCTCATCATTACCCCCAGC--AATTCCAGCACCCCTCTGCCGTCCGA 174911 Query 16063 CGGCATCAATCTCATCAATGAAGACGATGCATG---GTTGATTTTCGCGAGCGACTTCAA 16119 | |||||||||||||||||||| |||||||| | ||| |||||||| || | | Sbjct 174910 CAGCATCAATCTCATCAATGAAAACGATGCAGGAGCGTTCTTTTTCGCGTTCG----CGA 174855 Query 16120 AGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGG 16179 |||| ||||| || || || ||||||||||||||||| ||||| || | | | | | Sbjct 174854 AGAGGTCCCGGACTCGAGAAGCACCCACACCAACAAACATTTCCACGAATTCAGAGCCAG 174795 Query 16180 AACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTA 16238 | || | || || || || || || || |||| ||| || || | | |||||| Sbjct 174794 -ATATGGAGAAAAACGGCACGCCAGCCTCTCCGGCAACGGCGCGAGCCAACAAAGTCTTT 174736 Query 16239 CCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCA--CTTCCAA 16296 || || ||||| ||| | |||| | |||||| |||||| | || ||| || | | Sbjct 174735 CCGGTTCCTGGGGGACCTTCTAGGATGACACCTCTAGGAATCCTTGCACCAAGCTCCGTA 174676 Query 16297 AGTATCTCTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGCGT 16356 | | || |||| || || || || | || | ||| | ||| ||| ||| ||| | | Sbjct 174675 A--ACCTTTCAGATTCTTTGAGGAACTGTACGACCTCCTGCAACTCAAGTTTCGCGCCAT 174618 Query 16357 CAA 16359 ||| Sbjct 174617 CAA 174615 >seq932 Length=795108 Score = 152 bits (168), Expect = 6e-32 Identities = 990/1577 (63%), Gaps = 54/1577 (3%) Strand=Plus/Plus Query 111786 GAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAA----TGTGCCCAAATCTCAAA 111841 || ||||| ||| | |||||||||| ||| ||||| |||||| || ||||| Sbjct 205947 GATGATTCTATCGAAGGCATTTACGACAC-----CTGAAACGTTGTGCCGTCATTTCAAA 206001 Query 111842 GTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAG 111901 || || || |||||||| | | |||| | |||| | || ||| |||| | Sbjct 206002 GTCTGCCGGCGGTATCGGCCTCGCCGTCCACAACATCAGGGGCACTCGGTCCTATATTCG 206061 Query 111902 AGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 111961 ||| || |||||| || |||| ||| | || ||||| | || | || | ||| || Sbjct 206062 AGGCACCAATGGTACTTCCAATGGAATTGTCCCTATGCTCAGGGTGTACAATGACACCGC 206121 Query 111962 GCGCTATGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCC 112018 | ||||| | || | || | || ||||| | | ||| |||| | ||||| Sbjct 206122 CAGGTATGTTGATCAGGGCGGCGGGAAGCGTAAGGGCGCCTTTGCAATCTACTTGGAGCC 206181 Query 112019 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGC 112078 ||||| || || || | || ||||| || ||||| || || || | ||| || Sbjct 206182 CTGGCATGCAGACATTCTCGATTTCCTAGACTTGCGGAAGAATCATGGCAAGGAG-AGCA 206240 Query 112079 GCGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 112137 ||| ||| | |||||||||| | ||||||||||||||| | || ||||| || || | Sbjct 206241 GCG-TGCAAGGGATCTCTTCTATGGACTCTGGATTCCAGATTTGTTTATGAAAAGGGTCG 206299 Query 112138 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCG 112197 |||| | || ||||| ||||| ||||| | ||||||||||||| | |||| Sbjct 206300 AGGAAAATGCTTCATGGTCCCTCTTCTGTCCGAATGAGGCACCCGGTCTGGCTGATGTTT 206359 Query 112198 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGA 112257 ||||| || ||||| | ||||||| || |||||| || || | || || | || | Sbjct 206360 ATGGTGACGAATTTGAGGAGCTCTACATGAAATACGAGAAACAAGGGCGAGCAAGGGCAA 206419 Query 112258 CGGTGCCAGCTGC-CG--ATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 112314 | | | ||| || | || ||| | |||||| | || | || | ||||| || | Sbjct 206420 AGAT---TGATGCGCGAAAGGTTTGGTACGCTATTTTGGAGGCGCAGATTGAGACCGGAA 206476 Query 112315 CACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 112374 | ||||| ||||| || || || |||||||| ||||| || || |||| | ||| Sbjct 206477 CCCCATACATGCTCTATAAGGATTCCTGTAACAGGAAGAGCAACCAGCAGAACCTCGGTA 206536 Query 112375 TGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 112434 || | || || | ||||| || || | |||| || |||||| | Sbjct 206537 CCATTCGTTGCTCAAATTTGTGTACTGAGATTATTGAATACACCTCACCCGATGAGGTTG 206596 Query 112435 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAG----AGACAAAG 112490 | ||||| || | || || || || ||| ||| | ||| || || ||| | | Sbjct 206597 CCGTGTGCAATTTGGCCTCCATTGCACTCAACAAATTTGT---TCGAGTTTCTGACGATG 206653 Query 112491 -----------ACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAA 112539 || | || | || | | || || || || || || || | Sbjct 206654 GCTCCGCCCCTACCTACGACCACGACGCATTGGGGGAGATTGTGAGAATGGTAACCAACA 206713 Query 112540 ACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATA 112599 | | |||| | ||||| | || |||||||| |||||| || | || || Sbjct 206714 ATTTGAACAAGATAATTGACATCAACTTTTACCCGGTTGAGGAGGCCAAGAGGTCCAACT 206773 Query 112600 TGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTC 112659 |||| |||||||| || ||| |||| |||||||| || |||||| ||||| |||| Sbjct 206774 TGAGGCACCGTCCGATAGGTATCGGAGTCCAAGGGCTGGCGGATACCTTCAT--TTTGAT 206831 Query 112660 GC-CACG-CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAAT 112717 || | | |||| || ||| || ||| ||| | || | ||||| ||||| || Sbjct 206832 GCGTATGCCATTCGAGAGCGAAGAGGCGCGGGAGCTAAACAAGGACATATTCGAGACGAT 206891 Query 112718 GTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAAC 112777 ||| || ||| ||| ||| || | | | || | |||||| || ||||| || Sbjct 206892 CTATTACCATGCTGTTGCGGCCAGCTGCCAACTTGCGTCGCATGATGGGCCGTATGAGAC 206951 Query 112778 CTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGG-----AAGGT 112832 | || || || ||||| || | | || ||||| |||||| ||| Sbjct 206952 GTACATTGGCTCGCCCATGTCACAGGGTCTATTCCAGTTTGACTTGTGGGGCACAAAGCC 207011 Query 112833 GAGACCAAGCTTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTT 112892 | | | || | | | ||||| | |||| | || | | || ||| || Sbjct 207012 AACATCTGGC--CGTTGGAATTGGGAGGAACTCAGGCAAAAGGTGCTGCAGTCCGGTGTT 207069 Query 112893 CGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAAT 112952 ||||| || | | ||||| |||||||| || || || | || || ||||| || Sbjct 207070 CGTAATTCACTGCTTGTTGCACCGATGCCAACGGCGTCAACGTCCCAGATTTTGGGCAAC 207129 Query 112953 AATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAG 113012 ||||| |||||||| || |||||| | ||| | || | ||| || | |||||| Sbjct 207130 AATGAGTGCTTTGAGCCTTACACGTCCAACTTGTACACTCGCAGAGTGCTATCCGGAGAG 207189 Query 113013 TTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTC-TCTGGTCCAA 113071 ||| || || |||| |||| | ||| | || ||| ||| | | | | ||| || Sbjct 207190 TTTTGCATCGTAAACACGCATTTGGTGAAGGATCTC-CAGAAACTCAACTTGTGGAACAC 207248 Query 113072 GGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCC 113131 ||||||| | | || || ||| ||| || | || | ||| ||| || || Sbjct 207249 CACTATGAAGAACCGGATCGTTGCTGCGAATGGGTCAGTGCAGCACATTTCGGAGATCCC 207308 Query 113132 AGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGA 113191 | || ||| | | ||| || || |||||||||| |||| | ||||||| Sbjct 207309 CGCGGACATTCGTCTGCTATACAAGACGGTATGGGAAATCAGTCAGAAGAAAATCATTGA 207368 Query 113192 CATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGA 113251 ||||||| || ||||| |||||||||||| || || |||||| | ||||| Sbjct 207369 TCTGGCCGCTGACCGTGGCGCCTTCATTGATCAGTCGCAGAGCATGAATATCCACATGGC 207428 Query 113252 AAGTCC-AACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCA 113310 | || || | || |||||| || |||||| | ||| | ||||| ||||| | Sbjct 207429 AGCCCCGAATGTTG-GGAAGCTCAGCTCGATGCACTTTTACGGGTGGAAAGCAGGTCTGA 207487 Query 113311 AAACGGGGATGTATTAC 113327 |||| || |||| ||| Sbjct 207488 AAACTGGACTGTACTAC 207504 >seq864 Length=1598700 Score = 143 bits (158), Expect = 3e-29 Identities = 381/585 (65%), Gaps = 5/585 (1%) Strand=Plus/Minus Query 111786 GAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGG 111845 || ||||| ||| | |||||||||| ||| | | |||||| || ||||||| Sbjct 469804 GATGATTCTATCGAAGGCATTTACGACACNNTGAANCGNTGTGCCGTCATTTCAAAGTCT 469745 Query 111846 GCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGT 111905 || || |||||||| | | |||| | |||| | || ||| |||| |||| Sbjct 469744 GCCGGCGGTATCGGCCTCGCCGTCCACAACATCAGGGGCACTCGGTCCTATATTCGAGGC 469685 Query 111906 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 111965 || |||||| || |||| ||| | || ||||| | || | || | ||| || | Sbjct 469684 ACCAATGGTACTTCCAATGGAATTGTCCCNATGCTNAGGGTGTACAATGACACCGCCAGG 469625 Query 111966 TATGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022 ||||| | || | || | || ||||| | | ||| |||| | ||||| ||| Sbjct 469624 TATGTTGATCAGGGCGGCGGGAAGCGTAAGGGCGCCTTTGCAATCTACTTGGAGCCCTGG 469565 Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGG 112082 || || || || | || || || || ||| | || || || | || ||| ||| Sbjct 469564 CATGCAGACATTCTCGATTTNCTAGACTTGNGGAAGAATCATGGCAAGGAAGAGCAGCG- 469506 Query 112083 TGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141 ||| | |||||||||| | ||||||||||| ||| | || ||||| || || ||||| Sbjct 469505 TGCAAGGGATCTCTTCTATGGNCTCTGGATTCCNGATTTGTTTATGAAAAGGGTNGAGGA 469446 Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGG 112201 | || ||||| ||||| ||||| | ||||||||||||| | |||| || Sbjct 469445 AAATGNTTCATGGTCCCTCTTCTGTCCGAATGAGGCACCCGGTCTGGCTGATGTTTATGG 469386 Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGT 112261 || || ||||| | || |||| || |||||| || || | || || | || | | | Sbjct 469385 TGNCGAATTTGAGGAGCTNTACATGAAATACGAGAAACAAGGGCGAGCAAGGGCNAAGAT 469326 Query 112262 GCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 112321 || | || ||| | |||||| | || | || | ||||| || || ||||| Sbjct 469325 TGANGCGCGNAAGGTTTGGTACGCTATTTTGGAGGCGCAGATTGAGACCGGAACCCCATA 469266 Query 112322 TATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAA 112366 ||||| || || || |||||||| ||||| || || |||| Sbjct 469265 CATGCTNTATAAGGATTCCTGTAACAGGAAGAGCAACCAGCAGAA 469221 >seq827 Length=2024298 Score = 143 bits (158), Expect = 3e-29 Identities = 334/496 (67%), Gaps = 16/496 (3%) Strand=Plus/Minus Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944 ||||| ||||||||||| || || | || | ||||| | ||| | || || || || Sbjct 1044409 CGATCGAAGCGACCTGGACGCAGCAAAGCCTGGTCAAGAACATCCGCACGGTTTGTAGCA 1044350 Query 15945 GCGATGACAACAATACCTGTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTA 16004 || ||||||| | ||| | | | ||||| || |||||||| ||||| | |||||| Sbjct 1044349 GCTATGACAATGACACCAGAGTTGCCTTCAAAGCCGTCCATCTCAGTCAACATCTGGTTC 1044290 Query 16005 ATAGTTTGTTCCCGTTCATCATT--CGCTGGCATACCACCAGCACTGCGTTGCTTTCCCA 16062 | ||| ||||| || ||||| || | | || | || |||| | ||| ||| | Sbjct 1044289 AGAGTCTGTTCACGCTCATCGTTACCCCCAGC--AATTCCGGCACCCCTCTGCCGTCCGA 1044232 Query 16063 CGGCATCAATCTCATCAATGAAGACGATGCATG----GTTGATTTTCGCGAGCGACTTCA 16118 | |||||||||||||||||||| |||||||| | ||| |||||||| || | Sbjct 1044231 CAGCATCAATCTCATCAATGAAAACGATGCAAGGAGCGTTCTTTTTCGCGTTCG----CG 1044176 Query 16119 AAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG 16178 ||||| ||||| || || || || || ||||||||||| ||||| || | | | | Sbjct 1044175 AAGAGGTCCCGGACTCGGGAAGCACCTACGCCAACAAACATTTCCACGAATTCAGAGCCA 1044116 Query 16179 GAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTT 16237 | | || | || || || || || || || |||| ||| || || | | |||||| Sbjct 1044115 G-ATATGGAGAAAAATGGCACGCCAGCCTCTCCGGCAACGGCGCGAGCCAACAAAGTCTT 1044057 Query 16238 ACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC-ACTTCCAA 16296 || || ||||| ||| | |||| | |||||| |||||| | || || | ||| Sbjct 1044056 TCCGGTTCCTGGGGGACCTTCTAGGATGACACCTCTAGGAATCCTTGCACCGAGCTCCGT 1043997 Query 16297 AGTATCTCTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGCGT 16356 | | || |||| || || || || | || | ||| | ||| ||| ||| ||| | | Sbjct 1043996 A-AACCTTTCAGATTCTTTGAGGAACTGTACGACCTCCTGCAACTCAAGTTTCGCGCCAT 1043938 Query 16357 CAATCCCCTCAACATC 16372 ||| || |||| || Sbjct 1043937 CAACTCCAGCAACGTC 1043922 >seq251 Length=68518 Score = 122 bits (134), Expect = 1e-22 Identities = 260/379 (69%), Gaps = 16/379 (4%) Strand=Plus/Minus Query 15878 GATCTTACGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATT 15937 ||||| ||| ||||| ||||||||||| || |||||| ||||| | |||| || | Sbjct 40031 GATCTGACGGTCAAAACGACCTGGGCGCAGAAGCGCGGGGTCAAGCACATCAGGACG-GT 39973 Query 15938 CGTTGCGGCGATGACAA-CAATACCTGTTTCGTTATCAAAACCATCCATCTCTGTCAAAA 15996 || || ||||| | || || | | |||| ||||||||||||||||| | || Sbjct 39972 GGTCGCCGCGATAATAATCACGCCTTCATTCG-CCTCAAAACCATCCATCTCAACAAGAA 39914 Query 15997 GCTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCTGGCATACCACCAGCACTGCGTTG 16054 ||||||| | ||||| || || ||||| || ||| | | | |||| |||| || || Sbjct 39913 GCTGGTTCAGCGTTTGCTCGCGCTCATCGTTACCGCCGCC--AACACCGGCACCCCGGTG 39856 Query 16055 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGT---TGATTTTCGCGAGC 16111 ||||| ||||| |||||||| ||||||| ||||| ||| | |||| || || Sbjct 39855 ACGACCCACAGCATCGATCTCATCGATGAAGATAATGCACGGTGAATTCTTTTTGCCTGC 39796 Query 16112 GACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTT 16171 ||||| | || || || || ||| || ||||| || ||||| || || |||| Sbjct 39795 ----TCAAACATGTCGCGGACCCGTGAGGCACCGACACCCACGAACATTTCAACGAAGTC 39740 Query 16172 TGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAA 16230 | ||| | || | || || || ||||| | ||||| || | || ||||||| | Sbjct 39739 AGAACCGG-AGATGGTGAAAAACGGCACATTGGCCTCACCAGCCACAGCGCGGGCGATCA 39681 Query 16231 GAGTCTTACCCGTACCTGG 16249 | || ||||| || || || Sbjct 39680 GTGTTTTACCAGTCCCCGG 39662 >seq523 Length=1527182 Score = 104 bits (114), Expect = 3e-17 Identities = 169/241 (70%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 176890 GGCATCACGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACC 176949 ||| || || |||||| ||| || || || |||||||| || |||| || | || Sbjct 4730 GGCTTCGCGTACATTCAGCAGCTTTCCTCGCAGCGGGAAGACGCCATAGTAGTCTCTTCC 4789 Query 176950 AACCACAGAGAGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAG 177009 ||| ||||| || || | || || || | ||| || || || ||||| || | ||||| Sbjct 4790 AACGACAGAAAGTCCAGAAATTGCTAGGGCTTTGGCCGAGTCTCCCTCCGTTAGTATGAG 4849 Query 177010 TGTACACTTGCCAGATTGTGCCGTACCCGCCTTGTTCGCATCATCCAATTTGGGAATACC 177069 |||||||||| |||||| |||| || ||||| || ||||| | ||| | |||||| Sbjct 4850 TGTACACTTGGCAGATTCACGGCTACCAGCTTTGTTTGCGTCATCTAGTTTCGCAATACC 4909 Query 177070 A-GTAATTTTGGACTTTCGCGTACCGTCAGATTTTGAGAGTTCCTTCATCTCCTTAAACT 177128 | | | | || ||| || |||||||| |||| |||||||| ||| || |||| Sbjct 4910 ATGGACTCGTGCCTTTTTGC-CACCGTCAGTCTTTGCCAGTTCCTTACTCTGTTTGAACT 4968 Query 177129 T 177129 | Sbjct 4969 T 4969 >seq391 Length=1319552 Score = 104 bits (114), Expect = 3e-17 Identities = 269/405 (66%), Gaps = 10/405 (2%) Strand=Plus/Minus Query 176732 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 176791 ||||| |||||||| || ||||||| ||| ||| | ||| || | | | ||||| Sbjct 227781 AGACCTTTGATGTGCGACCCGTCGTGATCTTGATCGGCCATAATGAGAACGTGGCCATAT 227722 Query 176792 CGAAG------CTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGA-TCTT 176844 | || | ||| | || |||| | || || ||||| | | |||||| | || Sbjct 227721 CTGAGACTTTTCACGGTGTCTTCAGAATAGACTTTGCCGTGTTGCA-AGCCAAGAATTTT 227663 Query 176845 CTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACATT 176904 ||| ||| ||||| || ||| ||| ||| || ||| || || ||||| Sbjct 227662 CTTTAGAGAGTTGATTTCGGCGTTGTCCATGATTTGTTTGTGCTTGGCTTCGCGTACATT 227603 Query 176905 CTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACC 176964 | ||| || || || |||||||| || |||| || | ||||| ||||| || || Sbjct 227602 CAGCAGCTTTCCTCGCAGCGGGAAGACGCCATAGTAGTCTCTTCCAACGACAGAAAGTCC 227543 Query 176965 CGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTGCCAGA 177024 | || || || | ||| || || || ||||| || | ||||||||||||||| |||| Sbjct 227542 AGAAATTGCTAGGGCTTTGGCCGAGTCTCCCTCCGTTAGTATGAGTGTACACTTG-CAGA 227484 Query 177025 TTGTGCCGTACCCGCCTTGTTCGCATCATCCAATTTGGGAATACCAGTAATTTTGGACTT 177084 || |||| || ||||| || ||||| | ||| | ||||||| | | | ||| Sbjct 227483 TTCACGGCTACCAGCTTTGTTTGCGTCATCTAGTTTCGCAATACCATGGACTCGTGCCTT 227424 Query 177085 TCGCGTACCGTCAGATTTTGAGAGTTCCTTCATCTCCTTAAACTT 177129 | || |||||||| |||| |||||||| ||| || ||||| Sbjct 227423 TTGC-CACCGTCAGTCTTTGCCAGTTCCTTACTCTGTTTGAACTT 227380 >seq317 Length=30913 Score = 96.9 bits (106), Expect = 4e-15 Identities = 219/322 (68%), Gaps = 8/322 (2%) Strand=Plus/Minus Query 15932 GCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAAACCATCCATCTCTGT 15991 ||| || || || ||||||| | ||| ||| | | | ||||| || |||||||| | Sbjct 1924 GCGGTTTGTCGCCGCGATGAGGATAATGCCTTCATTGGTCTCAAACCCGTCCATCTC-GA 1866 Query 15992 CAAA-AGCTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCTGGCATACCACCAGCACT 16048 ||| |||||||| | || || || || |||||||| ||| | || | | || | Sbjct 1865 CAAGCAGCTGGTTCAACGTCTGCTCGCGCTCATCATTGCCGCCGCCAAGGC--CTGCCCC 1808 Query 16049 GCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCG 16108 ||| ||||| ||||||||||| |||||||||| |||||| || ||||| Sbjct 1807 GCGAGAGCGGCCCACCGCATCAATCTCGTCAATGAAGATGATGCAAGGCGCATTTTGCTT 1748 Query 16109 AGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAA 16168 || ||| || | || || || || | || || || || |||||||| |||||||| Sbjct 1747 CGCTTTTTCGAACATGTCACGAACGCGGCTTGCACCAACCCCGACAAACATTTCCACAAA 1688 Query 16169 GTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGA 16227 | | ||||| || | | ||| || ||||| | || ||||| | ||| ||||||| Sbjct 1687 ATCCGAACCGGAA-ATCGTAAAGAACGGCACATTCGCCTCGCCCGCTACGGCGCGGGCGA 1629 Query 16228 GAAGAGTCTTACCCGTACCTGG 16249 || || ||||| || || || Sbjct 1628 TCAGCGTTTTACCGGTTCCGGG 1607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620733686328560