Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1103 167 2e-35 seq250 167 2e-35 seq249 167 2e-35 seq239 167 2e-35 seq572 102 7e-16 >seq1103 Length=32286 Score = 167 bits (184), Expect = 2e-35 Identities = 322/469 (69%), Gaps = 21/469 (4%) Strand=Plus/Minus Query 552112 TACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAA 552171 || || ||||||| | |||||||| ||||| ||||| || | ||| || | ||| Sbjct 29496 TAGATCAAATTGTTTTAGTTGGTGGTTCTACTAGAATACCCGCAGTTCAAGAGTTAGTAA 29437 Query 552172 GTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCT 552231 | ||| | |||||| || ||| ||||||||||||||||||| | || || Sbjct 29436 AA-CAAATT--ATCGGTAAAGAACCTAATCAAAGTGTTAATCCAGATGAAGTAGTAGCAA 29380 Query 552232 ATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATA 552291 ||| || || | || |||| || | |||| |||| | || ||| Sbjct 29379 TTGGAGCTGCTGTACAGGCAGGAGTTTTGGCTGG---------TGAAG---TCAAAGATA 29332 Query 552292 TTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGA 552351 | || | |||||||||||||| ||||| | || ||||||| | || || | |||| Sbjct 29331 TATTATTATTAGATGTTACTCCTTTATCTTTAGGAGTAGAAACTTTAGGGGGAGTAATGA 29272 Query 552352 CTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTAC-G 552410 |||| | || | | || || ||| | ||| |||||||||| || ||||| || | Sbjct 29271 CTAAAATAATAGGGCGTAACACGACTGTACCTACTAAAAAATCTGAAGTTTTTTCAACCG 29212 Query 552411 TATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACT 552470 | | || |||||| | ||| ||| || || || |||| |||||| |||| ||| Sbjct 29211 CAGTT-GACAATCAACCAAATGTAGAAATACATGTTCTTCAAGGTGAAAGAGAATTTACT 29153 Query 552471 AAAGATAATAATCAACTT--GGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTG 552528 ||||||||||| || || ||||| ||| |||||| |||||| || |||||||| | Sbjct 29152 AAAGATAATAA--AAGTTTAGGTACATTTCGTTTAGATGGTATTATGCCCGCTCCTCGAG 29095 Query 552529 GAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTT 552577 | ||||| ||||| ||||| || || ||||| ||||| ||||| ||||| Sbjct 29094 GTGTACCTCAAATAGAAGTAACATTTGATATTGATGCTAATGGCATTTT 29046 Score = 131 bits (144), Expect = 1e-24 Identities = 136/178 (76%), Gaps = 3/178 (2%) Strand=Plus/Minus Query 550371 GTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATG 550430 |||||| | | ||||||| ||||| | ||||| || ||||| || || |||||||||| Sbjct 30099 GTGCTTATTTGGGTCAAGCTGTTACTCAAGCAGTCATTACTGTGCCTGCTTATTTTAATG 30040 Query 550431 ACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTA 550490 | |||||| | |||||||| ||||||||||||| || || |||||| ||||| | | | Sbjct 30039 ATTCACAAAGGCAAGCTACGAAAGATGCTGGACAAATAGCGGGACTTGATGTTTTAAGAA 29980 Query 550491 TTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGAT---AAACATAATGA 550545 |||| ||||||||||| || || || | | ||||| | ||| ||| ||||||| Sbjct 29979 TTATTAATGAACCTACAGCAGCATCATTATCTTATGGTTTAGATAAGAAAAATAATGA 29922 Score = 123 bits (136), Expect = 2e-22 Identities = 106/131 (81%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 361705 ACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGC 361764 |||||||| |||||| || ||||| ||||| ||||| ||| | | ||||| |||||||| Sbjct 29942 ACCATAAGATAATGATGCTGCTGTAGGTTCATTAATAATTCTTAAAACATCAAGTCCCGC 30001 Query 361765 TATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGT 361824 ||||| | |||||| || ||||| | ||||| |||||||||||| ||||| ||||| Sbjct 30002 TATTTGTCCAGCATCTTTCGTAGCTTGCCTTTGTGAATCATTAAAATAAGCAGGCACAGT 30061 Query 361825 AATCACTGCTT 361835 ||| ||||||| Sbjct 30062 AATGACTGCTT 30072 Score = 87.8 bits (96), Expect = 1e-11 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 360877 ATTATGTTTAGTTAATTTTCTTTCGCCCTCAAATATTT-TAATGCTAACAGTATCTTGAT 360935 ||||| |||||| |||| |||||| || | || | | || | ||| || | ||||| Sbjct 29144 ATTATCTTTAGTAAATTCTCTTTCACCTTGAAGAACATGTATTTCTA-CATTTGGTTGAT 29202 Query 360936 AATCAGTGTCTGTGGAAAATATTTTAGtttttttAGTAGGAATTACTGTATTTCTTGGTA 360995 ||| | || ||||| | || || |||||||||||| | || || | || Sbjct 29203 TGTCAACTGCGGTTGAAAAAACTTCAGATTTTTTAGTAGGTACAGTCGTGTTACGCCCTA 29262 Query 360996 TAATTGTAGTCATTTGGCGCTGTAAAGTTTCAACTCCTAACGATAAAGGAGTAATATCTA 361055 | ||| |||||||| | | ||||||||| |||||||| ||||||||||||| ||||| Sbjct 29263 TTATTTTAGTCATTACTCCCCCTAAAGTTTCTACTCCTAAAGATAAAGGAGTAACATCTA 29322 Query 361056 ATAACACTAAATTTT 361070 |||| | || || || Sbjct 29323 ATAATAATATATCTT 29337 >seq250 Length=55650 Score = 167 bits (184), Expect = 2e-35 Identities = 322/469 (69%), Gaps = 21/469 (4%) Strand=Plus/Minus Query 552112 TACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAA 552171 || || ||||||| | |||||||| ||||| ||||| || | ||| || | ||| Sbjct 36279 TAGATCAAATTGTTTTAGTTGGTGGTTCTACTAGAATACCCGCAGTTCAAGAGTTAGTAA 36220 Query 552172 GTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCT 552231 | ||| | |||||| || ||| ||||||||||||||||||| | || || Sbjct 36219 AA-CAAATT--ATCGGTAAAGAACCTAATCAAAGTGTTAATCCAGATGAAGTAGTAGCAA 36163 Query 552232 ATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATA 552291 ||| || || | || |||| || | |||| |||| | || ||| Sbjct 36162 TTGGAGCTGCTGTACAGGCAGGAGTTTTGGCTGG---------TGAAG---TCAAAGATA 36115 Query 552292 TTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGA 552351 | || | |||||||||||||| ||||| | || ||||||| | || || | |||| Sbjct 36114 TATTATTATTAGATGTTACTCCTTTATCTTTAGGAGTAGAAACTTTAGGGGGAGTAATGA 36055 Query 552352 CTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTAC-G 552410 |||| | || | | || || ||| | ||| |||||||||| || ||||| || | Sbjct 36054 CTAAAATAATAGGGCGTAACACGACTGTACCTACTAAAAAATCTGAAGTTTTTTCAACCG 35995 Query 552411 TATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACT 552470 | | || |||||| | ||| ||| || || || |||| |||||| |||| ||| Sbjct 35994 CAGTT-GACAATCAACCAAATGTAGAAATACATGTTCTTCAAGGTGAAAGAGAATTTACT 35936 Query 552471 AAAGATAATAATCAACTT--GGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTG 552528 ||||||||||| || || ||||| ||| |||||| |||||| || |||||||| | Sbjct 35935 AAAGATAATAA--AAGTTTAGGTACATTTCGTTTAGATGGTATTATGCCCGCTCCTCGAG 35878 Query 552529 GAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTT 552577 | ||||| ||||| ||||| || || ||||| ||||| ||||| ||||| Sbjct 35877 GTGTACCTCAAATAGAAGTAACATTTGATATTGATGCTAATGGCATTTT 35829 Score = 131 bits (144), Expect = 1e-24 Identities = 136/178 (76%), Gaps = 3/178 (2%) Strand=Plus/Minus Query 550371 GTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATG 550430 |||||| | | ||||||| ||||| | ||||| || ||||| || || |||||||||| Sbjct 36882 GTGCTTATTTGGGTCAAGCTGTTACTCAAGCAGTCATTACTGTGCCTGCTTATTTTAATG 36823 Query 550431 ACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTA 550490 | |||||| | |||||||| ||||||||||||| || || |||||| ||||| | | | Sbjct 36822 ATTCACAAAGGCAAGCTACGAAAGATGCTGGACAAATAGCGGGACTTGATGTTTTAAGAA 36763 Query 550491 TTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGAT---AAACATAATGA 550545 |||| ||||||||||| || || || | | ||||| | ||| ||| ||||||| Sbjct 36762 TTATTAATGAACCTACAGCAGCATCATTATCTTATGGTTTAGATAAGAAAAATAATGA 36705 Score = 123 bits (136), Expect = 2e-22 Identities = 106/131 (81%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 361705 ACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGC 361764 |||||||| |||||| || ||||| ||||| ||||| ||| | | ||||| |||||||| Sbjct 36725 ACCATAAGATAATGATGCTGCTGTAGGTTCATTAATAATTCTTAAAACATCAAGTCCCGC 36784 Query 361765 TATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGT 361824 ||||| | |||||| || ||||| | ||||| |||||||||||| ||||| ||||| Sbjct 36785 TATTTGTCCAGCATCTTTCGTAGCTTGCCTTTGTGAATCATTAAAATAAGCAGGCACAGT 36844 Query 361825 AATCACTGCTT 361835 ||| ||||||| Sbjct 36845 AATGACTGCTT 36855 Score = 87.8 bits (96), Expect = 1e-11 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 360877 ATTATGTTTAGTTAATTTTCTTTCGCCCTCAAATATTT-TAATGCTAACAGTATCTTGAT 360935 ||||| |||||| |||| |||||| || | || | | || | ||| || | ||||| Sbjct 35927 ATTATCTTTAGTAAATTCTCTTTCACCTTGAAGAACATGTATTTCTA-CATTTGGTTGAT 35985 Query 360936 AATCAGTGTCTGTGGAAAATATTTTAGtttttttAGTAGGAATTACTGTATTTCTTGGTA 360995 ||| | || ||||| | || || |||||||||||| | || || | || Sbjct 35986 TGTCAACTGCGGTTGAAAAAACTTCAGATTTTTTAGTAGGTACAGTCGTGTTACGCCCTA 36045 Query 360996 TAATTGTAGTCATTTGGCGCTGTAAAGTTTCAACTCCTAACGATAAAGGAGTAATATCTA 361055 | ||| |||||||| | | ||||||||| |||||||| ||||||||||||| ||||| Sbjct 36046 TTATTTTAGTCATTACTCCCCCTAAAGTTTCTACTCCTAAAGATAAAGGAGTAACATCTA 36105 Query 361056 ATAACACTAAATTTT 361070 |||| | || || || Sbjct 36106 ATAATAATATATCTT 36120 >seq249 Length=73938 Score = 167 bits (184), Expect = 2e-35 Identities = 322/469 (69%), Gaps = 21/469 (4%) Strand=Plus/Plus Query 552112 TACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAA 552171 || || ||||||| | |||||||| ||||| ||||| || | ||| || | ||| Sbjct 67370 TAGATCAAATTGTTTTAGTTGGTGGTTCTACTAGAATACCCGCAGTTCAAGAGTTAGTAA 67429 Query 552172 GTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCT 552231 | ||| | |||||| || ||| ||||||||||||||||||| | || || Sbjct 67430 AA-CAAATT--ATCGGTAAAGAACCTAATCAAAGTGTTAATCCAGATGAAGTAGTAGCAA 67486 Query 552232 ATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATA 552291 ||| || || | || |||| || | |||| |||| | || ||| Sbjct 67487 TTGGAGCTGCTGTACAGGCAGGAGTTTTGGCTGG---------TGAAG---TCAAAGATA 67534 Query 552292 TTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGA 552351 | || | |||||||||||||| ||||| | || ||||||| | || || | |||| Sbjct 67535 TATTATTATTAGATGTTACTCCTTTATCTTTAGGAGTAGAAACTTTAGGGGGAGTAATGA 67594 Query 552352 CTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTA-CG 552410 |||| | || | | || || ||| | ||| |||||||||| || ||||| | || Sbjct 67595 CTAAAATAATAGGGCGTAACACGACTGTACCTACTAAAAAATCTGAAGTTTTTTCAACCG 67654 Query 552411 TATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACT 552470 | | || |||||| | ||| ||| || || || |||| |||||| |||| ||| Sbjct 67655 CAGT-TGACAATCAACCAAATGTAGAAATACATGTTCTTCAAGGTGAAAGAGAATTTACT 67713 Query 552471 AAAGATAATAATCAACTT--GGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTG 552528 ||||||||||| || || ||||| ||| |||||| |||||| || |||||||| | Sbjct 67714 AAAGATAATAA--AAGTTTAGGTACATTTCGTTTAGATGGTATTATGCCCGCTCCTCGAG 67771 Query 552529 GAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTT 552577 | ||||| ||||| ||||| || || ||||| ||||| ||||| ||||| Sbjct 67772 GTGTACCTCAAATAGAAGTAACATTTGATATTGATGCTAATGGCATTTT 67820 Score = 131 bits (144), Expect = 1e-24 Identities = 136/178 (76%), Gaps = 3/178 (2%) Strand=Plus/Plus Query 550371 GTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATG 550430 |||||| | | ||||||| ||||| | ||||| || ||||| || || |||||||||| Sbjct 66767 GTGCTTATTTGGGTCAAGCTGTTACTCAAGCAGTCATTACTGTGCCTGCTTATTTTAATG 66826 Query 550431 ACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTA 550490 | |||||| | |||||||| ||||||||||||| || || |||||| ||||| | | | Sbjct 66827 ATTCACAAAGGCAAGCTACGAAAGATGCTGGACAAATAGCGGGACTTGATGTTTTAAGAA 66886 Query 550491 TTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGAT---AAACATAATGA 550545 |||| ||||||||||| || || || | | ||||| | ||| ||| ||||||| Sbjct 66887 TTATTAATGAACCTACAGCAGCATCATTATCTTATGGTTTAGATAAGAAAAATAATGA 66944 Score = 123 bits (136), Expect = 2e-22 Identities = 106/131 (81%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 361705 ACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGC 361764 |||||||| |||||| || ||||| ||||| ||||| ||| | | ||||| |||||||| Sbjct 66924 ACCATAAGATAATGATGCTGCTGTAGGTTCATTAATAATTCTTAAAACATCAAGTCCCGC 66865 Query 361765 TATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGT 361824 ||||| | |||||| || ||||| | ||||| |||||||||||| ||||| ||||| Sbjct 66864 TATTTGTCCAGCATCTTTCGTAGCTTGCCTTTGTGAATCATTAAAATAAGCAGGCACAGT 66805 Query 361825 AATCACTGCTT 361835 ||| ||||||| Sbjct 66804 AATGACTGCTT 66794 Score = 87.8 bits (96), Expect = 1e-11 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 360877 ATTATGTTTAGTTAATTTTCTTTCGCCCTCAAATATTT-TAATGCTAACAGTATCTTGAT 360935 ||||| |||||| |||| |||||| || | || | | || | ||| || | ||||| Sbjct 67722 ATTATCTTTAGTAAATTCTCTTTCACCTTGAAGAACATGTATTTCTA-CATTTGGTTGAT 67664 Query 360936 AATCAGTGTCTGTGGAAAATATTTTAGtttttttAGTAGGAATTACTGTATTTCTTGGTA 360995 ||| | || ||||| | || || |||||||||||| | || || | || Sbjct 67663 TGTCAACTGCGGTTGAAAAAACTTCAGATTTTTTAGTAGGTACAGTCGTGTTACGCCCTA 67604 Query 360996 TAATTGTAGTCATTTGGCGCTGTAAAGTTTCAACTCCTAACGATAAAGGAGTAATATCTA 361055 | ||| |||||||| | | ||||||||| |||||||| ||||||||||||| ||||| Sbjct 67603 TTATTTTAGTCATTACTCCCCCTAAAGTTTCTACTCCTAAAGATAAAGGAGTAACATCTA 67544 Query 361056 ATAACACTAAATTTT 361070 |||| | || || || Sbjct 67543 ATAATAATATATCTT 67529 >seq239 Length=192504 Score = 167 bits (184), Expect = 2e-35 Identities = 322/469 (69%), Gaps = 21/469 (4%) Strand=Plus/Minus Query 552112 TACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAA 552171 || || ||||||| | |||||||| ||||| ||||| || | ||| || | ||| Sbjct 43858 TAGATCAAATTGTTTTAGTTGGTGGTTCTACTAGAATACCCGCAGTTCAAGAGTTAGTAA 43799 Query 552172 GTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCT 552231 | ||| | |||||| || ||| ||||||||||||||||||| | || || Sbjct 43798 AA-CAAATT--ATCGGTAAAGAACCTAATCAAAGTGTTAATCCAGATGAAGTAGTAGCAA 43742 Query 552232 ATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATA 552291 ||| || || | || |||| || | |||| |||| | || ||| Sbjct 43741 TTGGAGCTGCTGTACAGGCAGGAGTTTTGGCTGG---------TGAAG---TCAAAGATA 43694 Query 552292 TTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGA 552351 | || | |||||||||||||| ||||| | || ||||||| | || || | |||| Sbjct 43693 TATTATTATTAGATGTTACTCCTTTATCTTTAGGAGTAGAAACTTTAGGGGGAGTAATGA 43634 Query 552352 CTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTAC-G 552410 |||| | || | | || || ||| | ||| |||||||||| || ||||| || | Sbjct 43633 CTAAAATAATAGGGCGTAACACGACTGTACCTACTAAAAAATCTGAAGTTTTTTCAACCG 43574 Query 552411 TATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACT 552470 | | || |||||| | ||| ||| || || || |||| |||||| |||| ||| Sbjct 43573 CAGTT-GACAATCAACCAAATGTAGAAATACATGTTCTTCAAGGTGAAAGAGAATTTACT 43515 Query 552471 AAAGATAATAATCAACTT--GGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTG 552528 ||||||||||| || || ||||| ||| |||||| |||||| || |||||||| | Sbjct 43514 AAAGATAATAA--AAGTTTAGGTACATTTCGTTTAGATGGTATTATGCCCGCTCCTCGAG 43457 Query 552529 GAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTT 552577 | ||||| ||||| ||||| || || ||||| ||||| ||||| ||||| Sbjct 43456 GTGTACCTCAAATAGAAGTAACATTTGATATTGATGCTAATGGCATTTT 43408 Score = 131 bits (144), Expect = 1e-24 Identities = 136/178 (76%), Gaps = 3/178 (2%) Strand=Plus/Minus Query 550371 GTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATG 550430 |||||| | | ||||||| ||||| | ||||| || ||||| || || |||||||||| Sbjct 44461 GTGCTTATTTGGGTCAAGCTGTTACTCAAGCAGTCATTACTGTGCCTGCTTATTTTAATG 44402 Query 550431 ACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTA 550490 | |||||| | |||||||| ||||||||||||| || || |||||| ||||| | | | Sbjct 44401 ATTCACAAAGGCAAGCTACGAAAGATGCTGGACAAATAGCGGGACTTGATGTTTTAAGAA 44342 Query 550491 TTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGAT---AAACATAATGA 550545 |||| ||||||||||| || || || | | ||||| | ||| ||| ||||||| Sbjct 44341 TTATTAATGAACCTACAGCAGCATCATTATCTTATGGTTTAGATAAGAAAAATAATGA 44284 Score = 123 bits (136), Expect = 2e-22 Identities = 106/131 (81%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 361705 ACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGC 361764 |||||||| |||||| || ||||| ||||| ||||| ||| | | ||||| |||||||| Sbjct 44304 ACCATAAGATAATGATGCTGCTGTAGGTTCATTAATAATTCTTAAAACATCAAGTCCCGC 44363 Query 361765 TATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGT 361824 ||||| | |||||| || ||||| | ||||| |||||||||||| ||||| ||||| Sbjct 44364 TATTTGTCCAGCATCTTTCGTAGCTTGCCTTTGTGAATCATTAAAATAAGCAGGCACAGT 44423 Query 361825 AATCACTGCTT 361835 ||| ||||||| Sbjct 44424 AATGACTGCTT 44434 Score = 87.8 bits (96), Expect = 1e-11 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 360877 ATTATGTTTAGTTAATTTTCTTTCGCCCTCAAATATTT-TAATGCTAACAGTATCTTGAT 360935 ||||| |||||| |||| |||||| || | || | | || | ||| || | ||||| Sbjct 43506 ATTATCTTTAGTAAATTCTCTTTCACCTTGAAGAACATGTATTTCTA-CATTTGGTTGAT 43564 Query 360936 AATCAGTGTCTGTGGAAAATATTTTAGtttttttAGTAGGAATTACTGTATTTCTTGGTA 360995 ||| | || ||||| | || || |||||||||||| | || || | || Sbjct 43565 TGTCAACTGCGGTTGAAAAAACTTCAGATTTTTTAGTAGGTACAGTCGTGTTACGCCCTA 43624 Query 360996 TAATTGTAGTCATTTGGCGCTGTAAAGTTTCAACTCCTAACGATAAAGGAGTAATATCTA 361055 | ||| |||||||| | | ||||||||| |||||||| ||||||||||||| ||||| Sbjct 43625 TTATTTTAGTCATTACTCCCCCTAAAGTTTCTACTCCTAAAGATAAAGGAGTAACATCTA 43684 Query 361056 ATAACACTAAATTTT 361070 |||| | || || || Sbjct 43685 ATAATAATATATCTT 43699 >seq572 Length=790827 Score = 102 bits (112), Expect = 7e-16 Identities = 249/377 (66%), Gaps = 2/377 (1%) Strand=Plus/Plus Query 552208 TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGAC 552267 |||| || |||||||||||||| ||||| || ||| | ||||| || |||||| |||| Sbjct 677063 TTAACCCNGATGAGGCTGTTGCTTATGGCGCTGCAGTGCAAGCCGCCATTCTTGCTGGTG 677122 Query 552268 AAACTGATGA-AAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGT 552326 | || ||| || ||| || | || |||| | ||||| || || | || ||||| Sbjct 677123 ACACCTCTGAGAAGACT-CAGGACCTTCTACTACTCGATGTCACGCCGTTGTCGCTTGGN 677181 Query 552327 TTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGT 552386 |||| || | || ||| | ||||| || ||| | || || || ||||| || Sbjct 677182 ATAGAGACTGCAGGTGGTGTGATGACCGTNCTCATCAAGAGGAACACGACTATNCCGACA 677241 Query 552387 AAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATT 552446 || || | |||| || || ||| | || || || ||| ||| ||||| | Sbjct 677242 AAGAAGCAGCAGATATTCTCNACTTATGCTGACAACCAGCCTGGTGTGCTGATTCAGGTG 677301 Query 552447 TTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAA 552506 ||||| || ||| | | ||| | ||||| ||| || || | || | | Sbjct 677302 TTTGAGGGTGAACGTACNCGCACCAGGGATAACAATATNCTGGGCAAATTCGAGCTGTCT 677361 Query 552507 GGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCC 552566 ||||| || || || || ||||| || ||||| |||||||| || || || || ||||| Sbjct 677362 GGTATCCCGCCCGCGCCGCGTGGGGTGCCGCAGATTGAAGTGACATTTGACATTGATGCA 677421 Query 552567 AATGGAATTTTGAATGT 552583 || || || | ||||| Sbjct 677422 AACGGTATCCTCAATGT 677438 Score = 89.7 bits (98), Expect = 4e-12 Identities = 169/250 (68%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 || ||||| ||| | || ||||| || |||||| ||||| ||||| |||| ||| Sbjct 675979 ATTGGTATCGATCTTGGTACCACCTACTCTTGTGTCGGTGTCTGGCAGAATGACCGTGTT 676038 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 || || ||||||||||| || ||||| | || ||||| || || || | ||||| || Sbjct 676039 GAGATCATTGCCAATGACCAGGGTAANCGCACCACTCCTTCCTACGTCGCCTTCACNGAC 676098 Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174 |||||| | | |||| || || || || |||| | | || || | || ||| Sbjct 676099 TCTGAACGTCTCATTGGCGACGCCGCCAAGAATCAGGTTGCCATCAACCCCTCTAACACT 676158 Query 550175 ATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGAT 550234 | || || || || ||| | || || | | || ||||| | |||||| | || Sbjct 676159 GTCTTNGACGCCAAGCGTCTCATCGGCCGTCGCTTCTCCGATTCNTCGGTTCAGTCTGAC 676218 Query 550235 ATGAAGCATT 550244 |||||||||| Sbjct 676219 ATGAAGCATT 676228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029236610695270