Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_019405.1 Length=215710 Score E Sequences producing significant alignments: (Bits) Value seq341 143 4e-29 >seq341 Length=33265 Score = 143 bits (158), Expect = 4e-29 Identities = 335/493 (68%), Gaps = 17/493 (3%) Strand=Plus/Plus Query 86203 GCGCACCGCGATCATGAACTCGTCGGTGACGTTGACGGCGTTGTGCAGGTTGGTGATCTT 86262 ||||||||| |||||| |||| |||| ||||| | | ||||||||| |||| Sbjct 13669 GCGCACCGCTTCCATGAAGGCGTCCGTGATGTTGAGACCATGGTGCAGGTTCAAACTCTT 13728 Query 86263 GCGGTTCTGGTCGCCGCCAGTAGGCTTGCGGGCCGTGATGAACTCGCGGATTTCCGGGTG 86322 |||||| ||||||| || || |||||| | ||||| |||||||||||| Sbjct 13729 GCGGTTAAAGTCGCCGG-AG--GGTTTGCGGATTTCAAGAAACTCTTCGATTTCCGGGTG 13785 Query 86323 GCTGATGTCCAGATAGACGGCGTTGGAGCCCCGGCGC-GTGCCGCCTTGGCTGACGGCGA 86381 | || |||||||| ||| ||||| || ||| | | | ||||| || || | Sbjct 13786 GTGGACATCCAGATAACAGGCCGCTGAGCCACGCCGCAGAGAC-CCTTGCGAGATCGCCA 13844 Query 86382 GAATCAGGCGATCGTCCACCGCC---ATGAACGGGATCACGCCGGTCGACTG--CGAACC 86436 | | || || ||||| | | ||||| ||||| | ||||| | ||| || | Sbjct 13845 GTGTAAGA-GA--GTCCATCACGCGAATGAAGGGGATAATGCCGGAGGTCTGTCCGTTCT 13901 Query 86437 CTTCGAGGTCTTCTCGCCCAGGCCGCGCAGGGCGCCGTAATAGGAGCCGATGCCGCCGCC 86496 ||| ||||||||| | ||||| ||| |||||| ||||||||||||||| Sbjct 13902 GGCCGAC--CTTCTCGCCAATCGAGCGCACATTGCCCCAATAGGTGCCGATGCCGCCGCC 13959 Query 86497 CATCGACGAGAGCCAGATGACCTC-GTCATAGTGCTCGGAGATCGACTCGCGGCTGTCCT 86555 | |||| |||||||| ||| ||| || | | | || || ||||||| Sbjct 13960 ATTTGACGCGAGCCAGACATTCTCTGTCCAGGTCCCCACA-ATATCATCCAGGCTGTCAC 14018 Query 86556 CGATCGCGGTGAGGAAGCAGGAGATCGGCAGGCCGCGCGCGGACCCGCCGTTCGACAGCA 86615 ||| | | | | |||||||||||||||| ||||||| | | ||| || || ||||| | Sbjct 14019 CGACCTGGTTCAAAAAGCAGGAGATCGGCAAGCCGCGCTCTGCCCCACCATTTGACAGGA 14078 Query 86616 GGGGCGTGGCGAACATGAACCAGAGGTTCGAGACATAGTCGTAGAGCCGCTGGCCGTGCT 86675 ||||| || |||||||||||| || || | |||||| || ||||||||| |||| | Sbjct 14079 CAGGCGTCGCCGGCATGAACCAGAGATTGGACATATAGTCATAAAGCCGCTGGGCGTGGT 14138 Query 86676 CGGCGTCATCCGC 86688 | | |||||||| Sbjct 14139 CCACATCATCCGC 14151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690134312103600