Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_019485.1 Length=59080 Score E Sequences producing significant alignments: (Bits) Value seq374 93.3 2e-14 seq360 93.3 2e-14 seq347 93.3 2e-14 seq331 93.3 2e-14 seq265 93.3 2e-14 seq262 93.3 2e-14 seq239 93.3 2e-14 >seq374 Length=37716 Score = 93.3 bits (102), Expect = 2e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 55547 CGGGATATAGCTCAGTTTGGTAGAGTGTCTGCTTTGGGAGCAGAATGTCGTTGGTTCAAG 55606 ||||||||||| ||||||||||| | | ||||||||||||||| |||||| ||||||| Sbjct 14306 CGGGATATAGCGCAGTTTGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGCAGGTTCAAA 14365 Query 55607 TCCAGCTATCCCGA 55620 ||| |||||||||| Sbjct 14366 TCCTGCTATCCCGA 14379 >seq360 Length=28839 Score = 93.3 bits (102), Expect = 2e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 55547 CGGGATATAGCTCAGTTTGGTAGAGTGTCTGCTTTGGGAGCAGAATGTCGTTGGTTCAAG 55606 ||||||||||| ||||||||||| | | ||||||||||||||| |||||| ||||||| Sbjct 27948 CGGGATATAGCGCAGTTTGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGCAGGTTCAAA 28007 Query 55607 TCCAGCTATCCCGA 55620 ||| |||||||||| Sbjct 28008 TCCTGCTATCCCGA 28021 >seq347 Length=42671 Score = 93.3 bits (102), Expect = 2e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 55547 CGGGATATAGCTCAGTTTGGTAGAGTGTCTGCTTTGGGAGCAGAATGTCGTTGGTTCAAG 55606 ||||||||||| ||||||||||| | | ||||||||||||||| |||||| ||||||| Sbjct 11305 CGGGATATAGCGCAGTTTGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGCAGGTTCAAA 11246 Query 55607 TCCAGCTATCCCGA 55620 ||| |||||||||| Sbjct 11245 TCCTGCTATCCCGA 11232 >seq331 Length=49663 Score = 93.3 bits (102), Expect = 2e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 55547 CGGGATATAGCTCAGTTTGGTAGAGTGTCTGCTTTGGGAGCAGAATGTCGTTGGTTCAAG 55606 ||||||||||| ||||||||||| | | ||||||||||||||| |||||| ||||||| Sbjct 46548 CGGGATATAGCGCAGTTTGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGCAGGTTCAAA 46607 Query 55607 TCCAGCTATCCCGA 55620 ||| |||||||||| Sbjct 46608 TCCTGCTATCCCGA 46621 >seq265 Length=48727 Score = 93.3 bits (102), Expect = 2e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 55547 CGGGATATAGCTCAGTTTGGTAGAGTGTCTGCTTTGGGAGCAGAATGTCGTTGGTTCAAG 55606 ||||||||||| ||||||||||| | | ||||||||||||||| |||||| ||||||| Sbjct 27501 CGGGATATAGCGCAGTTTGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGCAGGTTCAAA 27442 Query 55607 TCCAGCTATCCCGA 55620 ||| |||||||||| Sbjct 27441 TCCTGCTATCCCGA 27428 >seq262 Length=94814 Score = 93.3 bits (102), Expect = 2e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 55547 CGGGATATAGCTCAGTTTGGTAGAGTGTCTGCTTTGGGAGCAGAATGTCGTTGGTTCAAG 55606 ||||||||||| ||||||||||| | | ||||||||||||||| |||||| ||||||| Sbjct 70231 CGGGATATAGCGCAGTTTGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGCAGGTTCAAA 70290 Query 55607 TCCAGCTATCCCGA 55620 ||| |||||||||| Sbjct 70291 TCCTGCTATCCCGA 70304 >seq239 Length=192504 Score = 93.3 bits (102), Expect = 2e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 55547 CGGGATATAGCTCAGTTTGGTAGAGTGTCTGCTTTGGGAGCAGAATGTCGTTGGTTCAAG 55606 ||||||||||| ||||||||||| | | ||||||||||||||| |||||| ||||||| Sbjct 120099 CGGGATATAGCGCAGTTTGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGCAGGTTCAAA 120158 Query 55607 TCCAGCTATCCCGA 55620 ||| |||||||||| Sbjct 120159 TCCTGCTATCCCGA 120172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 188931880441692