Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq263 161 3e-35 >seq263 Length=70425 Score = 161 bits (178), Expect = 3e-35 Identities = 212/291 (73%), Gaps = 2/291 (1%) Strand=Plus/Plus Query 45443 CAATATCTAGACTTGCTGCAAGACATCTTAGAAAACGGCGTGGAGAAAGAAGATCGGACG 45502 |||||||| ||| | ||| |||||| || ||||| ||| || || ||| Sbjct 35401 CAATATCTGGACCTCCTGGCGGACATCCGCCTGAATGGCGTAGAGCGCAGCGACCGCACG 35460 Query 45503 GGAACAGGCACATTGTCGGTGTTCGGCCGTCAGCTGCGCTTTAA-CTTGCAGGACGGATT 45561 || ||||| ||| | | ||||| || || ||| |||||||| | ||||| | | | || Sbjct 35461 GGCACAGGAACAAAGGCCGTGTTTGGTCGGCAGATGCGCTTTGATCTTGCGAG-CAGTTT 35519 Query 45562 CCCGCTCGTGACGACGAAAAAGTTGCATATCCGCTCGATCATTTATGAACTGCTCTGGTT 45621 |||||| ||||||| ||||| |||| | || ||||| |||||||||||||| Sbjct 35520 CCCGCTGCTGACGACCAAAAAACTGCACCTGAAAAGCATTATTTACGAACTGCTCTGGTT 35579 Query 45622 TTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTGACGATTTGGGACGA 45681 ||| || ||||| |||||| || |||| || | || || || || |||| ||||| || Sbjct 35580 TTTGAAGGGCGACACGAATATTGCCTATCTGAAAGAAAACGGCGTTTCGATCTGGGATGA 35639 Query 45682 GTGGGCCGATGAAAACGGCGATCTCGGCCCAATCTACGGCGCGCAATGGCG 45732 |||||| |||||||| |||||||| ||||| |||| ||| ||||||||| Sbjct 35640 GTGGGCTGATGAAAATGGCGATCTTGGCCCGGTCTATGGCAAGCAATGGCG 35690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157748296299822