Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq263 123 4e-23 seq278 104 4e-17 >seq263 Length=70425 Score = 123 bits (136), Expect = 4e-23 Identities = 173/240 (72%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 122420 GACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGA-CCTGCA 122478 ||||| |||||||| || || | | | || || || ||||||||||| | ||| Sbjct 35452 GACCGCACGGGCACAGGAACAAAGGCCGTGTTTGGTCGGCAGATGCGCTTTGATCTTGCG 35511 Query 122479 AAAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCT 122538 | | ||||||||||| | ||||||||||| | ||||| ||| || | || || Sbjct 35512 AGCA-GTTTCCCGCTGCTGACGACCAAAAAACTGCACCTGAAAAGCATTATTTACGAACT 35570 Query 122539 TCTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTAT 122598 || ||||| | | |||||| || || || ||||||||||| ||| ||| || Sbjct 35571 GCTCTGGTTTTTGAAGGGCGACACGAATATTGCCTATCTGAAAGAAAACGGCGTTTCGAT 35630 Query 122599 CTGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCG 122658 ||||||||| ||||| |||||| |||| |||| |||||||| || || ||||||||||| Sbjct 35631 CTGGGATGAGTGGGCTGATGAAAATGGCGATCTTGGCCCGGTCTATGGCAAGCAATGGCG 35690 >seq278 Length=63877 Score = 104 bits (114), Expect = 4e-17 Identities = 70/77 (91%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 169732 TGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCC 169791 ||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||| ||| Sbjct 13934 TGTAGCTCAGTTGGT-TAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGTCCC 13876 Query 169792 GTCAGTCCTGCCATTTT 169808 |||| || |||||||| Sbjct 13875 GTCACTCGCGCCATTTT 13859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777621083990800