Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq492 87.8 3e-12 >seq492 Length=1085467 Score = 87.8 bits (96), Expect = 3e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || |||||||||||||||||||| || | ||||| || || Sbjct 147596 ATGCAGATTTTTGTGAAGACATTGACTGGAAAAACTATAACGCTTGAAGTTGAGTCATCG 147537 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| |||||||| | ||| || || || || || || || ||||| || || Sbjct 147536 GATACCATTGAGAACGTGAAGACTAAGATTCAGGACAAGGAGGGAATTCCTCCCGACCAG 147477 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || | |||||| || || |||||||| || ||| Sbjct 147476 CAGCGTCTGATTTTCGCTGGCAAGCAGCTTGAGGAT 147441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731861726346800