Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq475 91.5 3e-13 >seq475 Length=1546706 Score = 91.5 bits (100), Expect = 3e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 192319 AGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGT 192378 ||||| | || ||||| | || | ||| || ||| |||||||| || || ||||| Sbjct 934403 AGACGGAGCACCAAATGGAGGGTTGACTCCTTTTGGATGTTATAATCCGACAAGGTTCGG 934462 Query 192379 TCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCT 192438 || || |||||||| || || ||||| || | | |||||| || | || || || || Sbjct 934463 TCGTCCTCCAATTGCTTTCCGGCAAAAATCAGACGCTGTTGGTCCTGAGGAATGCCCTCC 934522 Query 192439 TTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTA 192498 || ||||| || || || ||||| | | || ||||||||||| || || || Sbjct 934523 TTGTCTTGGATCTTTGACTTGACATTTGCAACGTTGTCCGACGATTCTACCTCAAGGGTG 934582 Query 192499 ATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || || |||| || || | || |||||||| Sbjct 934583 ATGGTCTTCCCGGTTAGAGTCTTGACGAAAATCTGCAT 934620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984465834871050