Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq475 104 4e-17 >seq475 Length=1546706 Score = 104 bits (114), Expect = 4e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 || |||||||| || || | ||| ||||| |||||||| || || |||||||| | | | Sbjct 934439 ATGTTATAATCCGACAAGGTTCGGTCGTCCTCCAATTGCTTTCCGGCAAAAATCAGACGC 934498 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 |||||||| | || || || || || ||||| || || || ||||| | | | Sbjct 934499 TGTTGGTCCTGAGGAATGCCCTCCTTGTCTTGGATCTTTGACTTGACATTTGCAACGTTG 934558 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || ||||||||||| || || || ||||| || || |||| || || | ||| |||||| Sbjct 934559 TCCGACGATTCTACCTCAAGGGTGATGGTCTTCCCGGTTAGAGTCTTGACGAAAATCTGC 934618 Query 172068 AT 172069 || Sbjct 934619 AT 934620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905123294153400