Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_021298.1 Length=51252 Score E Sequences producing significant alignments: (Bits) Value seq184 102 3e-17 >seq184 Length=375247 Score = 102 bits (112), Expect = 3e-17 Identities = 191/278 (69%), Gaps = 2/278 (1%) Strand=Plus/Plus Query 40452 CCGTACTTCCGGGTGACGTACTGGATCACCTCGCCACGACGCCGGTCATCGAAGTCGATG 40511 |||||||| || ||| || | |||||||||||| || || | | |||||| ||| Sbjct 214838 CCGTACTTTTCGGAGACATAGTCGATCACCTCGCCGCGTCGATCTTGACAGAAGTCAATG 214897 Query 40512 TCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGTCCGTGC 40571 || | |||||||| || || || ||||| |||| || || |||||||| | | | Sbjct 214898 TCAAAGTCGGGCATCGAGACCCGATCGGGATTCAAAAAACGTTCGAAGATCAACTCATTG 214957 Query 40572 TCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAG 40631 | || |||||||||||||| | ||| | ||||| || || || || | || Sbjct 214958 GGGATGGGATCGAGGTCGGTGATGCGCAGGCTAAACGCGACGAGAGATCCCGCACCGGAT 215017 Query 40632 CCTCGCCCAGGGCCGACCCAGACGCCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACG 40691 || || || || || ||| || | | | ||| || |||| ||||| ||| || Sbjct 215018 CCGCGTCCGGGCCCAACCGGGATGGAACTTTGCTTGGCGTAGCGAATGAAATCCCAAACC 215077 Query 40692 ACGAGGAAGTACGACGGG-AAGCCCATCTGGATGATCA 40728 ||||||||||| | |||| ||||||||| | |||||| Sbjct 215078 ACGAGGAAGTA-GCCGGGAAAGCCCATCCCGTTGATCA 215114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163882614493764