Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_021339.1 Length=51077 Score E Sequences producing significant alignments: (Bits) Value seq184 93.3 1e-14 >seq184 Length=375247 Score = 93.3 bits (102), Expect = 1e-14 Identities = 189/278 (68%), Gaps = 2/278 (1%) Strand=Plus/Plus Query 40200 CCGTACTTCCGGGTGACGTACTGGATGACCTCGCCACGACGCCGGTCATCGAAGTCGATG 40259 |||||||| || ||| || | ||| |||||||| || || | | |||||| ||| Sbjct 214838 CCGTACTTTTCGGAGACATAGTCGATCACCTCGCCGCGTCGATCTTGACAGAAGTCAATG 214897 Query 40260 TCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAAGCGCTCGAAGATGAGCCCGTGC 40319 || | |||||||| || || || ||||| |||| || || |||||||| | | | | Sbjct 214898 TCAAAGTCGGGCATCGAGACCCGATCGGGATTCAAAAAACGTTCGAAGATCAACTCATTG 214957 Query 40320 TCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAG 40379 | || |||||||||||||| | ||| | ||||| || || || || | || Sbjct 214958 GGGATGGGATCGAGGTCGGTGATGCGCAGGCTAAACGCGACGAGAGATCCCGCACCGGAT 215017 Query 40380 CCCCGCCCAGGGCCGACCCAGACCCCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACG 40439 || || || || || ||| || | | ||| || |||| ||||| ||| || Sbjct 215018 CCGCGTCCGGGCCCAACCGGGATGGAACTTTGCTTGGCGTAGCGAATGAAATCCCAAACC 215077 Query 40440 ACGAGGAAGTACGACGGG-AACCCCATCTGGATGATCA 40476 ||||||||||| | |||| || |||||| | |||||| Sbjct 215078 ACGAGGAAGTA-GCCGGGAAAGCCCATCCCGTTGATCA 215114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163322621961714