Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_021531.1 Length=223989 Score E Sequences producing significant alignments: (Bits) Value seq263 116 5e-21 >seq263 Length=70425 Score = 116 bits (128), Expect = 5e-21 Identities = 148/201 (74%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 98991 CAGATGCG-TTTCAACTTGCAAGAAGGTTTCCCGCTGGTAACGACCAAGCGTTGCCACCT 99049 |||||||| ||| | ||||| || || |||||||||| | |||||||| ||||| Sbjct 35491 CAGATGCGCTTTGATCTTGCGAGCAG-TTTCCCGCTGCTGACGACCAAAAAACTGCACCT 35549 Query 99050 GCGCTCTATTATCCATGAACTGCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCT 99109 | ||||| | |||||||| ||||| |||| |||||||| ||||| || || Sbjct 35550 GAAAAGCATTATTTACGAACTGCTCTGGTTTTTGAAGGGCGACACGAATATTGCCTATCT 35609 Query 99110 GAAAGATAATGGTGTAACCATTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCC 99169 |||||| || || || | || ||||| || ||||| || |||||||||| || || || Sbjct 35610 GAAAGAAAACGGCGTTTCGATCTGGGATGAGTGGGCTGATGAAAATGGCGATCTTGGCCC 35669 Query 99170 GGTATACGGTAAGCAGTGGCG 99190 ||| || || ||||| ||||| Sbjct 35670 GGTCTATGGCAAGCAATGGCG 35690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716626740210920