Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq864 95.1 1e-13 seq932 93.3 5e-13 >seq864 Length=1598700 Score = 95.1 bits (104), Expect = 1e-13 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524 |||| || | || ||||| || | || || | ||| |||||||| || ||||| | Sbjct 469477 TCCAGAGNCCATAGAAGAGATCCCTTGCACGCTGCTCTTCCTTGCCATGATTCTTCCNCA 469536 Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 1628584 ||| || | |||| |||||| || ||||| ||||||| |||| ||||||||||||| Sbjct 469537 AGTCTAGNAAATCGAGAATGTCTGCATGCCAGGGCTCCAAGTAGATTGCAAAGGCGCCCT 469596 Query 1628585 TGCGCTTGCCGCCGCC 1628600 | ||||| |||||||| Sbjct 469597 TACGCTTCCCGCCGCC 469612 >seq932 Length=795108 Score = 93.3 bits (102), Expect = 5e-13 Identities = 103/136 (76%), Gaps = 1/136 (1%) Strand=Plus/Minus Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524 |||| ||| | || ||||| || | || || | ||| |||||||| || ||||| | Sbjct 206272 TCCAGAGTCCATAGAAGAGATCCCTTGCACGCTGCTC-TCCTTGCCATGATTCTTCCGCA 206214 Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 1628584 ||| || | |||| |||||| || ||||| ||||||| |||| ||||||||||||| Sbjct 206213 AGTCTAGGAAATCGAGAATGTCTGCATGCCAGGGCTCCAAGTAGATTGCAAAGGCGCCCT 206154 Query 1628585 TGCGCTTGCCGCCGCC 1628600 | ||||| |||||||| Sbjct 206153 TACGCTTCCCGCCGCC 206138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107047041360991