Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq557 82.4 6e-11 >seq557 Length=252103 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/209 (69%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||| || |||||||| || || || || |||||| | || |||| | Sbjct 154970 ATGCAGATTTTCGTGAAAACTTTGACCGGAAAGACTATTACCCTTGAGGTGGAGTCCTCG 155029 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| | | | || || |||||| || || |||||| | |||| |||||| Sbjct 155030 GACACTATTGAGAATGTGAAGACGAAGATTCAGGACAAGGAAGGCATCCCCG--GATCAG 155087 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | || || || ||||| ||||||| || || ||||||||| Sbjct 155088 CAGCGCCTGATCTTCGCCGGCAAGCAGCTTGAGGACGGTCGTACTTTGAGTGACTACAAC 155147 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGT 107764 ||||| |||||||| || | ||| |||| Sbjct 155148 ATTCAGAAGGAGTCCACCCTTCACCTGGT 155176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398871340747747