Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_023575.1 Length=45550 Score E Sequences producing significant alignments: (Bits) Value seq170 107 6e-19 >seq170 Length=434408 Score = 107 bits (118), Expect = 6e-19 Identities = 203/298 (68%), Gaps = 3/298 (1%) Strand=Plus/Minus Query 30090 CGATGATCTCTGTTGTGTAGCGGTCCTGACCGTCCTGCGCCTGCCACTTTCGAGTTCTGA 30149 |||||||||| ||||||||||| | | || || | | | ||| | || ||| || Sbjct 385262 CGATGATCTCCGTTGTGTAGCGCTTGTTGCCATCGCGGTCGTCCCAGCTGCGGGTTTGGA 385203 Query 30150 GTGAACCCTCGACGTACAGTTGCTGACCCTTCTTTACGTGCTGCCCGACGATCTCCGCCA 30209 | || |||| ||| | || |||||||| || | || ||| || || |||| Sbjct 385202 GCTTTCCTTCGATGTAGACCTGGCGACCCTTCGCTAAATACTCCCCACAGAGTTCGGCCA 385143 Query 30210 ACTTCCCGAAGAACACCACGCGGTGCCATTCGGTGCGCTCCTGTTGCTGGCCGGTCTGCT 30269 |||||| | | || | ||| ||||||||||| |||||||| |||| || || | Sbjct 385142 GCTTCCCCCAAACGACAATGCGATGCCATTCGGTACGCTCCTGGCGCTGACC---CTCTT 385086 Query 30270 TGTCCTTCCAGCTCTCGCTGGTGGCGAGGGTGATGTTGGTCACCGCATTGCCGTTGGGCA 30329 |||| |||||||||||||| ||||||| | | | ||||| || | ||| | | Sbjct 385085 TGTCGTTCCAGCTCTCGCTCGTGGCGATGCTAAAGTTGGCTACTGGTGATCCGCTCGCAC 385026 Query 30330 TATAGCGAGTTTCCGGGTCACCACCGACGTTGCCAACCAGAATGACTTTGTTAACGCC 30387 | |||||| |||||||| |||| ||| || |||| |||||| || || || || Sbjct 385025 TGTAGCGAACCTCCGGGTCCTGCCCGAGGTTTCCCACCAAAATGACCTTATTGACTCC 384968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145636457820912