Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq263 141 9e-29 >seq263 Length=70425 Score = 141 bits (156), Expect = 9e-29 Identities = 377/573 (66%), Gaps = 26/573 (5%) Strand=Plus/Plus Query 142228 GGAACGAAAGCAATCTTCGGTCATCAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTT 142287 ||||| || || | || |||| |||||||| || |||| || | || || || Sbjct 35467 GGAACAAAGGCCGTGTTTGGTCGGCAGATGCGCTTTGATCTTGCGAGCAGTTTCCCGCTG 35526 Query 142288 CTCTCCACGAAGAAGCTGCATCTGAAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAA 142347 || | || || || ||||| ||||| || || |||||| || ||||| | || Sbjct 35527 CTGACGACCAAAAAACTGCACCTGAAAAGCATTATTTACGAACTGCTCTGGTTTTTGAAG 35586 Query 142348 GGCGATACGAACATCAAGTATCTTCACGATCACAACGTCAAGATCTGGGATGAATGGGCT 142407 ||||| ||||| || ||||| | || || ||| |||||||||||| |||||| Sbjct 35587 GGCGACACGAATATTGCCTATCTGAAAGAAAACGGCGTTTCGATCTGGGATGAGTGGGCT 35646 Query 142408 GATGCCAATGGCAACCTCGGACCTGTCTACGGCAAGCAGTGGATGTCCTGGACGA-ACCT 142466 |||| |||||| | || || || ||||| |||||||| ||| |||| ||| ||| Sbjct 35647 GATGAAAATGGCGATCTTGGCCCGGTCTATGGCAAGCAATGGCGCAGCTGGGCGACACC- 35705 Query 142467 CGTTGTCGCTGGAGATGACGTCACAGACGAACCGATCGATCAGATCCGCCGGATCATTAC 142526 | || ||||| | || | ||| ||| || | | | || Sbjct 35706 ---AGACG--------GACGTGTTA-TTGACCAGATTGATGAGGTGC---------TCAC 35744 Query 142527 TGACTTGAAGAAGTCTCCTCATTCTCGTCGTCACATCGTCACCGCGTGGAACCCTGCTGA 142586 | | |||||| ||| | || ||||| || |||||| | || |||||||| || || Sbjct 35745 CGCCCTGAAGACCAATCCGAACTCACGTCGCCATATCGTCTCGGCATGGAACCCGGCAGA 35804 Query 142587 AGTCGACGACATGGCACTTCCTCCGTGTCACATGATGTTCCAATTCCACGTCGACTCGAA 142646 ||| ||| |||||| | || || || || | ||||| || ||| ||||| Sbjct 35805 TGTCAGCGATATGGCATTGCCGCCTTGCCATTGCCTCTTCCAGTTTGCCGT--GCTCGAC 35862 Query 142647 GAAGCGTCTGTCATGCCAGCTGTATCAGCGTTCGGCAGACTGGTTCCTCGGCGTTCCGTT 142706 | | | || || |||||||| ||||| | || || || || |||||||| ||||| Sbjct 35863 GGAAAG-CTCTCTTGCCAGCTCTATCAAAGATCAGCCGATGTCTTTCTCGGCGTACCGTT 35921 Query 142707 CAACATTGCTTCGTACGCGCTTCTCACACAGCTCATTGCTCGCGAATGCGGTCTGGAACT 142766 ||| ||||| || ||||| | ||||||| | || || |||| | || ||| | || Sbjct 35922 CAATATTGCCTCTTACGCTTTGCTCACACTCATGATGGCACGCGCAGCAGGGCTGCAGCT 35981 Query 142767 CGGAGACTTCGTCCACACCTTCGGCAATTCGCA 142799 |||||| || |||||||| | ||| || |||| Sbjct 35982 CGGAGAGTTTGTCCACACACTTGGCGATGCGCA 36014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500492174242480