Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq932 192 8e-44 >seq932 Length=795108 Score = 192 bits (212), Expect = 8e-44 Identities = 632/971 (65%), Gaps = 11/971 (1%) Strand=Plus/Minus Query 69255 AACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGC 69314 |||||| | || ||||| | || || | ||| || || || ||||||| | | Sbjct 206637 AACAAATTTGTTGAGTGCAATGGAGGCCAAATTGCACACGGCAACCTCATCGGGTGAGGT 206578 Query 69315 ATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATT 69374 |||| || ||||| ||||| | ||| || || || || || || ||||| || Sbjct 206577 GTATTCAATAATCTCAGTACACAAATTTGAGCAACGAATGGTACCGAGGTTCTGCTGGTT 206518 Query 69375 ACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGA 69434 ||||| ||||||||| ||||| || || || | || || || || |||||||| | Sbjct 206517 GCTCTTCCTGTTACAGGAATCCTTATAGAGCATGTATGGGGTTCCGGTCTCAATCTGCGC 206458 Query 69435 TTCGATAATAGATTTCCAAACGACCCTAGCATTTAT-TACGGTCTTGTAACGCTTCTCTT 69493 || | ||||| | |||||| | |||| || | | |||| ||| | || Sbjct 206457 CTCCAAAATAGCGTACCAAACCTTTCGCGCATCAATCTTTGCCCTTGCT-CGCCCTTGTT 206399 Query 69494 TTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGAC 69553 | || |||| | || ||| || ||||| || || |||||||| ||| || || Sbjct 206398 TCTCGTATTTCATGTAGAGCTCCTCAAATTCGTCACCATAAACATCAGCCAGACCGGGTG 206339 Query 69554 ATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGAT 69613 ||||| ||||| | | ||||| | ||| |||| || | ||||||||| | || Sbjct 206338 CCTCATTCGGACAGAAGAGGGACCATGAAGCATTTTCCTCGACCCTTTTCATAAACAAAT 206279 Query 69614 CGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttt 69672 | |||||||| || | ||| |||||||| || | | | ||| | | | || | | Sbjct 206278 CTGGAATCCAGAGTCC-ATAGAAGAGATCCCTTGCACGCTGCTCTCCTTGCCATGATTCT 206220 Query 69673 tttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATG 69732 | ||| || || || || | ||| || | |||||| || || | || || || | | Sbjct 206219 TCCGCAAG-TCTAGGAAATCGAGAATGTCTGCATGCCAGGGCTCCAAGTAGATTGCAAAG 206161 Query 69733 ACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTC 69792 | ||| || || || |||||||| | || ||||| |||| ||| || || || Sbjct 206160 GCGCCCTTACGCTTCCCGCCGCCCTGATCAACATACCTGGCGGTGTCATTGTACACCCTG 206101 Query 69793 AGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCG 69852 ||||| || | ||| ||||| || ||||||| || || |||||| | | | Sbjct 206100 AGCATAGGGACAATTCCATTGGAAGTACCATTGGTGCCTCGAATATAGGACCGAGTGCCC 206041 Query 69853 CGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGT 69912 | || || | | || || || || || || || || || | ||||||||| Sbjct 206040 CTGATGTTGTGGACGGCGAGGCCGATACCGCCGGCAGACTTTGAAATGACGGCACAACGT 205981 Query 69913 TTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTA 69972 |||| ||||| || || || || || |||||| |||| | || | ||| || || Sbjct 205980 TTCAG-GTGTCGTAAATGCCTTCGATAGAATCATCAGTCATAGTGAGTAAAAAGCAACT- 205923 Query 69973 GACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCAT 70032 |||| ||| || | || |||||||| || || ||||| || || || ||||| Sbjct 205922 GACAGCTGAGGACGACAGGTACCCGCATTGAACAAAGTAGGTGAAGCATGTGTGAAGAGC 205863 Query 70033 TTT--TCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTC 70090 || | ||| ||| | ||| || | | | | || || || | ||||||| | Sbjct 205862 TTGCGTGAGAGAGCG--TCGTAGGTGTTGAGAATGGCCTCCATGTCACCGAGATGAATGC 205805 Query 70091 CTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCA 70150 | | || || | ||| | ||||||||| || || || || | ||||| | ||| ||| Sbjct 205804 CAACCGAAACCCTCATAAGCATATGCTGCGGACGCTCAACAATCTTATTGTCAATTCTCA 205745 Query 70151 ACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGT 70210 || ||| || |||||| ||| |||||||||||||| | ||| |||||||| | |||| Sbjct 205744 GCAAGTAGGACCTTTCCAAAGTCTTAAACCCAAAATAATCGTACGAAAAGTCACGATCGT 205685 Query 70211 AAATAATAACA 70221 |||| ||| || Sbjct 205684 AAATGATAGCA 205674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686899157517720