Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq932 138 1e-27 seq1105 131 2e-25 seq276 131 2e-25 seq269 131 2e-25 seq268 131 2e-25 seq262 131 2e-25 seq249 131 2e-25 seq239 131 2e-25 seq864 127 3e-24 seq33 98.7 1e-15 seq251 93.3 5e-14 seq523 91.5 2e-13 seq391 87.8 2e-12 seq317 87.8 2e-12 >seq932 Length=795108 Score = 138 bits (152), Expect = 1e-27 Identities = 376/571 (66%), Gaps = 6/571 (1%) Strand=Plus/Minus Query 111233 AGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATT 111292 || || || || ||||||||||| || || |||||| ||||| || | ||| Sbjct 206624 AGTGCAATGGAGGCCAAATTGCACACGGCAACCTCATCGGGTGAGGTGTATTCAATAATC 206565 Query 111293 TCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTG 111352 || ||||| || || || | ||| || || | |||| ||||| |||||| |||| Sbjct 206564 TCAGTACACAAATTTGAGCAACGAATGGTACCGAGGTTCTGCTGGTTGCTCTTCCTGTTA 206505 Query 111353 CACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCC 111412 || | |||||| ||||||||||| || || || ||||| |||| | | | |||||| Sbjct 206504 CAGGAATCCTTATAGAGCATGTATGGGGTTCCGGTCTCAATCTGCGCCTCCAAAATAGCG 206445 Query 111413 TTCCAAA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGT 111471 | ||||| | | ||| | | || | || || || || | |||||| || | Sbjct 206444 TACCAAACCTTTCGCGCATCAATCTTTGCCCTT-GCTCGCCCTTGTTTCTCGTATTTCAT 206386 Query 111472 GTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACA 111531 |||||| | ||||| || ||||| | || | ||||| ||||||| | ||||| Sbjct 206385 GTAGAGCTCCTCAAATTCGTCACCATAAACATCAGCCAGACCGGGTGCCTCATTCGGACA 206326 Query 111532 GAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG 111591 ||| || |||||| | || |||||| |||| ||||| || | ||||||||||| || Sbjct 206325 GAAGAGGGACCATGAAGCATTTTCCTCGACCCTTTTCATAAACAAATCTGGAATCCAGAG 206266 Query 111592 GGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAG 111651 | |||||||| || || ||| || | || || || || || || || Sbjct 206265 TCCATAGAAGAGATCCCTTGCACGCTGCTC-TCCTTGCCATGATTCTTCCGCAAGTCTAG 206207 Query 111652 GAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG--- 111708 ||| || | || || || ||||| ||||| | |||| ||| | | ||||| || Sbjct 206206 GAAATCGAGAATGTCTGCATGCCAGGGCTCCAAGTAGATTGCAAAGGCGCCCTTACGCTT 206147 Query 111709 ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAAT 111768 | || | |||| ||||| | || ||| | || | || | ||||| || | ||| Sbjct 206146 CCCGCCGCCCTGATCAACATACCTGGCGGTGTCATTGTACACCCTGAGCATAGGGACAAT 206087 Query 111769 ACCATCTGATTGACCATTTGTCCCCCGAATA 111799 |||| || |||||| || || |||||| Sbjct 206086 TCCATTGGAAGTACCATTGGTGCCTCGAATA 206056 >seq1105 Length=37519 Score = 131 bits (144), Expect = 2e-25 Identities = 233/335 (70%), Gaps = 4/335 (1%) Strand=Plus/Minus Query 11482 ATCAAGGATATCCACGCGATTAGTGGCCGCAATAACCACAATGCCAGTCTCATTGTCAAA 11541 ||| | |||||| | | ||| || || ||||| || | ||| ||||| | | ||||| Sbjct 4262 ATCTAAGATATCTGCTCTATTTGTTGCAGCAATCACAATAATTCCAGTATTACCTTCAAA 4203 Query 11542 GCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCAT 11601 ||||||||| || || ||||||||||| | |||||||||||| || ||||| | | Sbjct 4202 GCCATCCATTTCTGTCAGTAATTGATTTAATGTTTGTTCTCTTTCGTCATTACCGCCCCC 4143 Query 11602 ACCACCAGCACTGCGTTGCTTGCCC-ACCGCATCAATCTCATCAATGAAGACAATACATG 11660 | | || | | | ||| | |||| || |||||||| || ||||| || || ||||||| Sbjct 4142 AACTCCTGTTCCTCTTTG-TCGCCCAACAGCATCAATTTCGTCAATAAATACTATACATG 4084 Query 11661 GTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAA 11720 | |||||| || ||| ||| | || ||||| ||| || || || ||||||| Sbjct 4083 GAGCATTTTCTTTTGCTTTTTTAAATAAGTCTCGAACTCTTGATGCGCCAACGCCAACAA 4024 Query 11721 ACATCTCCACAAAGTTTGCGGCAGA-GCACTGGATGAATGGGACATTTGATTCACCCGCG 11779 |||| || ||||| | || | || ||| || || || || ||| |||||| || Sbjct 4023 ACATTTCTACAAACTCTGAACCTGATATACT-GAAAAACGGAACGCTTGCTTCACCAGCT 3965 Query 11780 ATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGG 11814 || ||| || | || || ||||| || ||||| Sbjct 3964 ATCGCTTTTGCTAATAGTGTTTTTCCTGTTCCTGG 3930 >seq276 Length=35306 Score = 131 bits (144), Expect = 2e-25 Identities = 233/335 (70%), Gaps = 4/335 (1%) Strand=Plus/Plus Query 11482 ATCAAGGATATCCACGCGATTAGTGGCCGCAATAACCACAATGCCAGTCTCATTGTCAAA 11541 ||| | |||||| | | ||| || || ||||| || | ||| ||||| | | ||||| Sbjct 24123 ATCTAAGATATCTGCTCTATTTGTTGCAGCAATCACAATAATTCCAGTATTACCTTCAAA 24182 Query 11542 GCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCAT 11601 ||||||||| || || ||||||||||| | |||||||||||| || ||||| | | Sbjct 24183 GCCATCCATTTCTGTCAGTAATTGATTTAATGTTTGTTCTCTTTCGTCATTACCGCCCCC 24242 Query 11602 ACCACCAGCACTGCGTTGCTTGCCC-ACCGCATCAATCTCATCAATGAAGACAATACATG 11660 | | || | | | ||| | |||| || |||||||| || ||||| || || ||||||| Sbjct 24243 AACTCCTGTTCCTCTTTG-TCGCCCAACAGCATCAATTTCGTCAATAAATACTATACATG 24301 Query 11661 GTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAA 11720 | |||||| || ||| ||| | || ||||| ||| || || || ||||||| Sbjct 24302 GAGCATTTTCTTTTGCTTTTTTAAATAAGTCTCGAACTCTTGATGCGCCAACGCCAACAA 24361 Query 11721 ACATCTCCACAAAGTTTGCGGCAGA-GCACTGGATGAATGGGACATTTGATTCACCCGCG 11779 |||| || ||||| | || | || ||| || || || || ||| |||||| || Sbjct 24362 ACATTTCTACAAACTCTGAACCTGATATACT-GAAAAACGGAACGCTTGCTTCACCAGCT 24420 Query 11780 ATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGG 11814 || ||| || | || || ||||| || ||||| Sbjct 24421 ATCGCTTTTGCTAATAGTGTTTTTCCTGTTCCTGG 24455 >seq269 Length=31307 Score = 131 bits (144), Expect = 2e-25 Identities = 233/335 (70%), Gaps = 4/335 (1%) Strand=Plus/Plus Query 11482 ATCAAGGATATCCACGCGATTAGTGGCCGCAATAACCACAATGCCAGTCTCATTGTCAAA 11541 ||| | |||||| | | ||| || || ||||| || | ||| ||||| | | ||||| Sbjct 23914 ATCTAAGATATCTGCTCTATTTGTTGCAGCAATCACAATAATTCCAGTATTACCTTCAAA 23973 Query 11542 GCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCAT 11601 ||||||||| || || ||||||||||| | |||||||||||| || ||||| | | Sbjct 23974 GCCATCCATTTCTGTCAGTAATTGATTTAATGTTTGTTCTCTTTCGTCATTACCGCCCCC 24033 Query 11602 ACCACCAGCACTGCGTTGCTTGCCC-ACCGCATCAATCTCATCAATGAAGACAATACATG 11660 | | || | | | ||| | |||| || |||||||| || ||||| || || ||||||| Sbjct 24034 AACTCCTGTTCCTCTTTG-TCGCCCAACAGCATCAATTTCGTCAATAAATACTATACATG 24092 Query 11661 GTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAA 11720 | |||||| || ||| ||| | || ||||| ||| || || || ||||||| Sbjct 24093 GAGCATTTTCTTTTGCTTTTTTAAATAAGTCTCGAACTCTTGATGCGCCAACGCCAACAA 24152 Query 11721 ACATCTCCACAAAGTTTGCGGCAGA-GCACTGGATGAATGGGACATTTGATTCACCCGCG 11779 |||| || ||||| | || | || ||| || || || || ||| |||||| || Sbjct 24153 ACATTTCTACAAACTCTGAACCTGATATACT-GAAAAACGGAACGCTTGCTTCACCAGCT 24211 Query 11780 ATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGG 11814 || ||| || | || || ||||| || ||||| Sbjct 24212 ATCGCTTTTGCTAATAGTGTTTTTCCTGTTCCTGG 24246 >seq268 Length=42779 Score = 131 bits (144), Expect = 2e-25 Identities = 233/335 (70%), Gaps = 4/335 (1%) Strand=Plus/Minus Query 11482 ATCAAGGATATCCACGCGATTAGTGGCCGCAATAACCACAATGCCAGTCTCATTGTCAAA 11541 ||| | |||||| | | ||| || || ||||| || | ||| ||||| | | ||||| Sbjct 11068 ATCTAAGATATCTGCTCTATTTGTTGCAGCAATCACAATAATTCCAGTATTACCTTCAAA 11009 Query 11542 GCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCAT 11601 ||||||||| || || ||||||||||| | |||||||||||| || ||||| | | Sbjct 11008 GCCATCCATTTCTGTCAGTAATTGATTTAATGTTTGTTCTCTTTCGTCATTACCGCCCCC 10949 Query 11602 ACCACCAGCACTGCGTTGCTTGCCC-ACCGCATCAATCTCATCAATGAAGACAATACATG 11660 | | || | | | ||| | |||| || |||||||| || ||||| || || ||||||| Sbjct 10948 AACTCCTGTTCCTCTTTG-TCGCCCAACAGCATCAATTTCGTCAATAAATACTATACATG 10890 Query 11661 GTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAA 11720 | |||||| || ||| ||| | || ||||| ||| || || || ||||||| Sbjct 10889 GAGCATTTTCTTTTGCTTTTTTAAATAAGTCTCGAACTCTTGATGCGCCAACGCCAACAA 10830 Query 11721 ACATCTCCACAAAGTTTGCGGCAGA-GCACTGGATGAATGGGACATTTGATTCACCCGCG 11779 |||| || ||||| | || | || ||| || || || || ||| |||||| || Sbjct 10829 ACATTTCTACAAACTCTGAACCTGATATACT-GAAAAACGGAACGCTTGCTTCACCAGCT 10771 Query 11780 ATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGG 11814 || ||| || | || || ||||| || ||||| Sbjct 10770 ATCGCTTTTGCTAATAGTGTTTTTCCTGTTCCTGG 10736 >seq262 Length=94814 Score = 131 bits (144), Expect = 2e-25 Identities = 233/335 (70%), Gaps = 4/335 (1%) Strand=Plus/Minus Query 11482 ATCAAGGATATCCACGCGATTAGTGGCCGCAATAACCACAATGCCAGTCTCATTGTCAAA 11541 ||| | |||||| | | ||| || || ||||| || | ||| ||||| | | ||||| Sbjct 15062 ATCTAAGATATCTGCTCTATTTGTTGCAGCAATCACAATAATTCCAGTATTACCTTCAAA 15003 Query 11542 GCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCAT 11601 ||||||||| || || ||||||||||| | |||||||||||| || ||||| | | Sbjct 15002 GCCATCCATTTCTGTCAGTAATTGATTTAATGTTTGTTCTCTTTCGTCATTACCGCCCCC 14943 Query 11602 ACCACCAGCACTGCGTTGCTTGCCC-ACCGCATCAATCTCATCAATGAAGACAATACATG 11660 | | || | | | ||| | |||| || |||||||| || ||||| || || ||||||| Sbjct 14942 AACTCCTGTTCCTCTTTG-TCGCCCAACAGCATCAATTTCGTCAATAAATACTATACATG 14884 Query 11661 GTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAA 11720 | |||||| || ||| ||| | || ||||| ||| || || || ||||||| Sbjct 14883 GAGCATTTTCTTTTGCTTTTTTAAATAAGTCTCGAACTCTTGATGCGCCAACGCCAACAA 14824 Query 11721 ACATCTCCACAAAGTTTGCGGCAGA-GCACTGGATGAATGGGACATTTGATTCACCCGCG 11779 |||| || ||||| | || | || ||| || || || || ||| |||||| || Sbjct 14823 ACATTTCTACAAACTCTGAACCTGATATACT-GAAAAACGGAACGCTTGCTTCACCAGCT 14765 Query 11780 ATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGG 11814 || ||| || | || || ||||| || ||||| Sbjct 14764 ATCGCTTTTGCTAATAGTGTTTTTCCTGTTCCTGG 14730 >seq249 Length=73938 Score = 131 bits (144), Expect = 2e-25 Identities = 233/335 (70%), Gaps = 4/335 (1%) Strand=Plus/Plus Query 11482 ATCAAGGATATCCACGCGATTAGTGGCCGCAATAACCACAATGCCAGTCTCATTGTCAAA 11541 ||| | |||||| | | ||| || || ||||| || | ||| ||||| | | ||||| Sbjct 46267 ATCTAAGATATCTGCTCTATTTGTTGCAGCAATCACAATAATTCCAGTATTACCTTCAAA 46326 Query 11542 GCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCAT 11601 ||||||||| || || ||||||||||| | |||||||||||| || ||||| | | Sbjct 46327 GCCATCCATTTCTGTCAGTAATTGATTTAATGTTTGTTCTCTTTCGTCATTACCGCCCCC 46386 Query 11602 ACCACCAGCACTGCGTTGCTTGCCC-ACCGCATCAATCTCATCAATGAAGACAATACATG 11660 | | || | | | ||| | |||| || |||||||| || ||||| || || ||||||| Sbjct 46387 AACTCCTGTTCCTCTTTG-TCGCCCAACAGCATCAATTTCGTCAATAAATACTATACATG 46445 Query 11661 GTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAA 11720 | |||||| || ||| ||| | || ||||| ||| || || || ||||||| Sbjct 46446 GAGCATTTTCTTTTGCTTTTTTAAATAAGTCTCGAACTCTTGATGCGCCAACGCCAACAA 46505 Query 11721 ACATCTCCACAAAGTTTGCGGCAGA-GCACTGGATGAATGGGACATTTGATTCACCCGCG 11779 |||| || ||||| | || | || ||| || || || || ||| |||||| || Sbjct 46506 ACATTTCTACAAACTCTGAACCTGATATACT-GAAAAACGGAACGCTTGCTTCACCAGCT 46564 Query 11780 ATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGG 11814 || ||| || | || || ||||| || ||||| Sbjct 46565 ATCGCTTTTGCTAATAGTGTTTTTCCTGTTCCTGG 46599 >seq239 Length=192504 Score = 131 bits (144), Expect = 2e-25 Identities = 233/335 (70%), Gaps = 4/335 (1%) Strand=Plus/Minus Query 11482 ATCAAGGATATCCACGCGATTAGTGGCCGCAATAACCACAATGCCAGTCTCATTGTCAAA 11541 ||| | |||||| | | ||| || || ||||| || | ||| ||||| | | ||||| Sbjct 64960 ATCTAAGATATCTGCTCTATTTGTTGCAGCAATCACAATAATTCCAGTATTACCTTCAAA 64901 Query 11542 GCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCAT 11601 ||||||||| || || ||||||||||| | |||||||||||| || ||||| | | Sbjct 64900 GCCATCCATTTCTGTCAGTAATTGATTTAATGTTTGTTCTCTTTCGTCATTACCGCCCCC 64841 Query 11602 ACCACCAGCACTGCGTTGCTTGCCC-ACCGCATCAATCTCATCAATGAAGACAATACATG 11660 | | || | | | ||| | |||| || |||||||| || ||||| || || ||||||| Sbjct 64840 AACTCCTGTTCCTCTTTG-TCGCCCAACAGCATCAATTTCGTCAATAAATACTATACATG 64782 Query 11661 GTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAA 11720 | |||||| || ||| ||| | || ||||| ||| || || || ||||||| Sbjct 64781 GAGCATTTTCTTTTGCTTTTTTAAATAAGTCTCGAACTCTTGATGCGCCAACGCCAACAA 64722 Query 11721 ACATCTCCACAAAGTTTGCGGCAGA-GCACTGGATGAATGGGACATTTGATTCACCCGCG 11779 |||| || ||||| | || | || ||| || || || || ||| |||||| || Sbjct 64721 ACATTTCTACAAACTCTGAACCTGATATACT-GAAAAACGGAACGCTTGCTTCACCAGCT 64663 Query 11780 ATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGG 11814 || ||| || | || || ||||| || ||||| Sbjct 64662 ATCGCTTTTGCTAATAGTGTTTTTCCTGTTCCTGG 64628 >seq864 Length=1598700 Score = 127 bits (140), Expect = 3e-24 Identities = 371/574 (65%), Gaps = 11/574 (2%) Strand=Plus/Plus Query 111233 AGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATT 111292 || || || || ||||| ||||| || || |||||| ||||| || | ||| Sbjct 469125 AGTGCAATGGAGGCCAANTTGCACACGGCAACCTCATCGGGTGAGGTGTATTCAATAATC 469184 Query 111293 TCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTG 111352 || ||||| || || || | ||| || || | |||| ||||| |||||| |||| Sbjct 469185 TCAGTACACAAATTNGAGCAACGAATGGTACCGAGGTTCTGCTGGTTGCTCTTCCTGTTA 469244 Query 111353 CACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCC 111412 || | |||||| || |||||||| || || || ||||| |||| | | | |||||| Sbjct 469245 CAGGAATCCTTATANAGCATGTATGGGGTTCCGGTCTCAATCTGCGCCTCCAAAATAGCG 469304 Query 111413 TTCCAAACATCG-GCGGCTGGTACAAT---GGCGTTGGCCCGTCCCTCCGCCTCGTACTT 111468 | |||||| | ||| | |||| || | || || || | |||||| || Sbjct 469305 TACCAAACCTTNCGCGCNT----CAATCTTNGCCCTTGCTCGCCCTTGTTTCTCGTATTT 469360 Query 111469 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGG 111528 |||| || | ||||| || |||| | || | ||||| ||||||| | || Sbjct 469361 CATGTANAGCTCCTCAAATTCGNCACCATAAACATCAGCCAGACCGGGTGCCTCATTCGG 469420 Query 111529 ACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCA 111588 |||||| || |||||| | || |||||| |||| ||||| || | || |||||||| Sbjct 469421 ACAGAAGAGGGACCATGAANCATTTTCCTCNACCCTTTTCATAAACAAATCNGGAATCCA 469480 Query 111589 CAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTC 111648 || | |||||||| || || |||||| | || || || | || || Sbjct 469481 GAGNCCATAGAAGAGATCCCTTGCACGCTGCTCTTCCTTGCCATGATTCTTCCNCAAGTC 469540 Query 111649 AAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG 111708 || || || | || || || ||||| ||||| | |||| ||| | | ||||| || Sbjct 469541 TAGNAAATCGAGAATGTCTGCATGCCAGGGCTCCAAGTAGATTGCAAAGGCGCCCTTACG 469600 Query 111709 ---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAAT 111765 | || | |||| ||||| | || ||| | || | || | ||||| || | Sbjct 469601 CTTCCCGCCGCCCTGATCAACATACCTGGCGGTGTCATTGTACACCCTNAGCATNGGGAC 469660 Query 111766 AATACCATCTGATTGACCATTTGTCCCCCGAATA 111799 ||| |||| || |||||| || || |||||| Sbjct 469661 AATTCCATTGGAAGTACCATTGGTGCCTCGAATA 469694 >seq33 Length=841369 Score = 98.7 bits (108), Expect = 1e-15 Identities = 197/290 (68%), Gaps = 13/290 (4%) Strand=Plus/Minus Query 11450 CGATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCC 11509 ||||| || ||||| || || || | || | ||||| | |||| | || || ||||| Sbjct 175088 CGATCGAAGCGACCTGGACGCAGCAAAGCCTGGTCAAGAACATCCGCACGGTTTGTGGCA 175029 Query 11510 GCAATAACCACAATGCCAGTCTCATTGTCAAAGCCATCCATCTCGGTGAGTAATTGATTA 11569 || || || | | |||| | ||||| || |||||||| || | | ||| || Sbjct 175028 GCTATGACAATGACACCAGAGTTGCCTTCAAACCCGTCCATCTCAGTCAACATTTGGTTC 174969 Query 11570 ATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCA---CCAGCACTGCGTTGCTTGCCC 11626 | || ||||| | ||||||||| | | | || ||||||| | ||| || Sbjct 174968 AGAGTCTGTTCACGCTCATCATTACC---CCCAGCAATTCCAGCACCCCTCTGCCGTCCG 174912 Query 11627 ACCGCATCAATCTCATCAATGAAGACAATACATG---GTTGATTTTCGCGGGCGATTTCA 11683 || |||||||||||||||||||| || || || | ||| |||||||| || | Sbjct 174911 ACAGCATCAATCTCATCAATGAAAACGATGCAGGAGCGTTCTTTTTCGCGTTCG----CG 174856 Query 11684 AAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAA 11733 ||||| || || || | |||||||||||||||||||| ||||| || Sbjct 174855 AAGAGGTCCCGGACTCGAGAAGCACCCACACCAACAAACATTTCCACGAA 174806 >seq251 Length=68518 Score = 93.3 bits (102), Expect = 5e-14 Identities = 252/380 (66%), Gaps = 18/380 (5%) Strand=Plus/Minus Query 11443 GATCTTGCGATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATT 11502 ||||| || ||||||||||| ||||| || || ||| ||||| | || || | | Sbjct 40031 GATCTGACGGTCAAAACGACCTGGGCGCAGAAGCGCGGGGTCAAGCACAT-CAGGACGGT 39973 Query 11503 AGTGGCCGCAATAACCACAATGCCAGTCTCATT---GTCAAAGCCATCCATCTCGGTGAG 11559 || ||||| |||| | | ||| ||||| ||||| ||||||||||| || Sbjct 39972 GGTCGCCGCGATAATAATCACGCC---TTCATTCGCCTCAAAACCATCCATCTCAACAAG 39916 Query 11560 TAATTGATTAATTGTTTGTTCTCTCTCATCATT--TGCTGGCATACCACCAGCACTGCGT 11617 | || || | ||||| || | |||||| || || | | | |||| |||| || Sbjct 39915 AAGCTGGTTCAGCGTTTGCTCGCGCTCATCGTTACCGCCGCC--AACACCGGCACCCCGG 39858 Query 11618 TGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGT---TGATTTTCGCGG 11674 || ||||| ||||| |||||||| ||||||| ||| || ||| | |||| || Sbjct 39857 TGACGACCCACAGCATCGATCTCATCGATGAAGATAATGCACGGTGAATTCTTTTTGCCT 39798 Query 11675 GCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAG 11734 || ||||| | ||||| |||| | |||||| ||||| || ||||| || || ||| Sbjct 39797 GC----TCAAACATGTCGCGGACCCGTGAGGCACCGACACCCACGAACATTTCAACGAAG 39742 Query 11735 TTTGCGGCAGAGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGG 11794 | | | ||| || || || ||||| | ||||| || | || ||||||| Sbjct 39741 TCAGAACCGGAGATGGTGAAAAACGGCACATTGGCCTCACCAGCCACAGCGCGGGCGATC 39682 Query 11795 AGGGTCTTTCCCGTACCTGG 11814 || || || || || || || Sbjct 39681 AGTGTTTTACCAGTCCCCGG 39662 >seq523 Length=1527182 Score = 91.5 bits (100), Expect = 2e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 182697 TTACCGCGAAGTGGGAACACACCGTAGTGATCACGACCAACGACAGAGAGACCCGCAACC 182756 || || || || ||||| || || |||| || | ||||||||||| || || | || Sbjct 4752 TTTCCTCGCAGCGGGAAGACGCCATAGTAGTCTCTTCCAACGACAGAAAGTCCAGAAATT 4811 Query 182757 GCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAGAGTACACTTTCCAGATTGTGCC 182816 || |||| ||| ||||| || |||||||| | ||||| |||||||| |||||| Sbjct 4812 GCTAGGGCTTTGGCCGAGTCTCCCTCCGTTAGTATGAGTGTACACTTGGCAGATTCACGG 4871 Query 182817 GTACCCGCCTTGTTCGCGTCATCCAACTTGGGAATACC 182854 |||| || ||||| |||||||| | || | |||||| Sbjct 4872 CTACCAGCTTTGTTTGCGTCATCTAGTTTCGCAATACC 4909 >seq391 Length=1319552 Score = 87.8 bits (96), Expect = 2e-12 Identities = 115/158 (73%), Gaps = 1/158 (1%) Strand=Plus/Minus Query 182697 TTACCGCGAAGTGGGAACACACCGTAGTGATCACGACCAACGACAGAGAGACCCGCAACC 182756 || || || || ||||| || || |||| || | ||||||||||| || || | || Sbjct 227595 TTTCCTCGCAGCGGGAAGACGCCATAGTAGTCTCTTCCAACGACAGAAAGTCCAGAAATT 227536 Query 182757 GCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAGAGTACACTTTCCAGATTGTGCC 182816 || |||| ||| ||||| || |||||||| | ||||| |||||| || |||||| Sbjct 227535 GCTAGGGCTTTGGCCGAGTCTCCCTCCGTTAGTATGAGTGTACAC-TTGCAGATTCACGG 227477 Query 182817 GTACCCGCCTTGTTCGCGTCATCCAACTTGGGAATACC 182854 |||| || ||||| |||||||| | || | |||||| Sbjct 227476 CTACCAGCTTTGTTTGCGTCATCTAGTTTCGCAATACC 227439 >seq317 Length=30913 Score = 87.8 bits (96), Expect = 2e-12 Identities = 245/372 (66%), Gaps = 12/372 (3%) Strand=Plus/Minus Query 11483 TCAAGGATATCCACGCGATTAGTGGCCGCAATAACCACAATGCCAGTCTCATTG---TCA 11539 || || | |||| ||| || || ||||| || | | |||||| |||||| ||| Sbjct 1938 TCCAGCACATCCGGGCGGTTTGTCGCCGCGATGAGGATAATGCCT---TCATTGGTCTCA 1882 Query 11540 AAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGC 11599 || || ||||||||| || | || || | || || || | ||||||||| || | | Sbjct 1881 AACCCGTCCATCTCGACAAGCAGCTGGTTCAACGTCTGCTCGCGCTCATCATT-GCCGCC 1823 Query 11600 ATACCA---CCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATA 11656 ||| || || | ||| |||||||||||||||||| |||||||||| || Sbjct 1822 G--CCAAGGCCTGCCCCGCGAGAGCGGCCCACCGCATCAATCTCGTCAATGAAGATGATG 1765 Query 11657 CATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCA 11716 || || ||||| || |||| || | || ||||| | | ||||| || || Sbjct 1764 CAAGGCGCATTTTGCTTCGCTTTTTCGAACATGTCACGAACGCGGCTTGCACCAACCCCG 1705 Query 11717 ACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGGATGAATGGGACATTTGATTCACCC 11776 |||||||| |||||||| | | | || | | ||| || ||||| | || ||| Sbjct 1704 ACAAACATTTCCACAAAATCCGAACCGGAAATCGTAAAGAACGGCACATTCGCCTCGCCC 1645 Query 11777 GCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCT 11836 || | ||| ||||||| || || || || || || || || | || || |||||| Sbjct 1644 GCTACGGCGCGGGCGATCAGCGTTTTACCGGTTCCGGGTGGTCCAACAAGCAGCGCGCCT 1585 Query 11837 CGGGGGATCTTG 11848 ||||| ||| Sbjct 1584 TTCGGGATTTTG 1573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628023184000800