Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_028657.1 Length=60919 Score E Sequences producing significant alignments: (Bits) Value seq170 84.2 9e-12 >seq170 Length=434408 Score = 84.2 bits (92), Expect = 9e-12 Identities = 201/299 (67%), Gaps = 5/299 (2%) Strand=Plus/Plus Query 7279 GGTGTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTACATG 7338 || || || || |||||| |||| || ||| |||| |||||||| ||||||| Sbjct 384968 GGAGTCAATAAGGTCATTTTGGTGGGAAACCTCGGGCAGGACCCGGAGGTTCGCTACAGT 385027 Query 7339 CCCAACGGCAATGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGACAAG 7398 | | ||| | || ||||| | | | ||||||| |||||||||||||| ||||| Sbjct 385028 GCGAGCGGATCACCAGTAGCCAACTTTAGCATCGCCACGAGCGAGAGCTGGAACGACAA- 385086 Query 7399 CAGACCGGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTCGCCTG 7458 ||| || |||| ||||| || |||| | || ||| | || | | || ||| Sbjct 385087 -AGA-GGGTCAGCGCCAGGAGCGTACCGAATGGCATCGCATTGTCGTTTGGGGGAAGCTG 385144 Query 7459 GCGGAGATCGCCGGCGAGTACCT-GCGCAAGGGTTCCCAGGTCTACGTCGAAGGCAGCCT 7517 || || || || ||||| | ||| |||||| |||||||||| ||||||| | || Sbjct 385145 GCCGAACTCTGTGGGGAGTATTTAGCG-AAGGGTCGCCAGGTCTACATCGAAGGAAAGCT 385203 Query 7518 GCGCACCCGCAAGTGGCAGGCTCAGGACGGCCAGGACCGATACACCACCGAGGTAATCG 7576 | ||||||| ||| | | | || ||| | | || ||||| || ||| | |||| Sbjct 385204 CCAAACCCGCAGCTGGGACGACCGCGATGGCAACAAGCGCTACACAACGGAGATCATCG 385262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194816601964206