Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_028773.1 Length=182145 Score E Sequences producing significant alignments: (Bits) Value seq1103 87.8 2e-12 seq250 87.8 2e-12 seq239 87.8 2e-12 >seq1103 Length=32286 Score = 87.8 bits (96), Expect = 2e-12 Identities = 76/93 (82%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 127514 TTGGAGAGTTGGCAGAGTTTGGTTTATTGCACCTGACTTGAAATCAGACGATCCCCTAAA 127573 |||||||| ||| |||||| |||||||||| |||| ||||||||||| || | Sbjct 19210 TTGGAGAGGTGGTAGAGTT-GGTTTATTGCGTCTGATTTGAAATCAGATGAACTGT---- 19264 Query 127574 AAGGGTCCGTGGGTTCGAATCCCACACTCTCCT 127606 |||| |||||||||||||||||||| ||||||| Sbjct 19265 AAGGTTCCGTGGGTTCGAATCCCACCCTCTCCT 19297 >seq250 Length=55650 Score = 87.8 bits (96), Expect = 2e-12 Identities = 76/93 (82%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 127514 TTGGAGAGTTGGCAGAGTTTGGTTTATTGCACCTGACTTGAAATCAGACGATCCCCTAAA 127573 |||||||| ||| |||||| |||||||||| |||| ||||||||||| || | Sbjct 25992 TTGGAGAGGTGGTAGAGTT-GGTTTATTGCGTCTGATTTGAAATCAGATGAACTGT---- 26046 Query 127574 AAGGGTCCGTGGGTTCGAATCCCACACTCTCCT 127606 |||| |||||||||||||||||||| ||||||| Sbjct 26047 AAGGTTCCGTGGGTTCGAATCCCACCCTCTCCT 26079 >seq239 Length=192504 Score = 87.8 bits (96), Expect = 2e-12 Identities = 76/93 (82%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 127514 TTGGAGAGTTGGCAGAGTTTGGTTTATTGCACCTGACTTGAAATCAGACGATCCCCTAAA 127573 |||||||| ||| |||||| |||||||||| |||| ||||||||||| || | Sbjct 33572 TTGGAGAGGTGGTAGAGTT-GGTTTATTGCGTCTGATTTGAAATCAGATGAACTGT---- 33626 Query 127574 AAGGGTCCGTGGGTTCGAATCCCACACTCTCCT 127606 |||| |||||||||||||||||||| ||||||| Sbjct 33627 AAGGTTCCGTGGGTTCGAATCCCACCCTCTCCT 33659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582727819843400