Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_028827.1 Length=50165 Score E Sequences producing significant alignments: (Bits) Value seq184 116 1e-21 >seq184 Length=375247 Score = 116 bits (128), Expect = 1e-21 Identities = 192/277 (69%), Gaps = 0/277 (0%) Strand=Plus/Plus Query 40124 CCGTACTTCTCGGTGACGTACCGGATGACCTCGCCGCGACGCCGGTCATCGAAGTCGATG 40183 |||||||| |||| ||| || ||| ||||||||||| || | | |||||| ||| Sbjct 214838 CCGTACTTTTCGGAGACATAGTCGATCACCTCGCCGCGTCGATCTTGACAGAAGTCAATG 214897 Query 40184 TCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGC 40243 |||| ||||||||| || || || ||||| |||| || || |||||||| | | | | Sbjct 214898 TCAAAGTCGGGCATCGAGACCCGATCGGGATTCAAAAAACGTTCGAAGATCAACTCATTG 214957 Query 40244 TCCAGTGGATCGAGGTCGGTGATCCCGAGGCAGTAGGCGACCAGCGAACCGGCTGCCGAG 40303 | ||||||||||||||||| | |||| | ||||| || || || || | || Sbjct 214958 GGGATGGGATCGAGGTCGGTGATGCGCAGGCTAAACGCGACGAGAGATCCCGCACCGGAT 215017 Query 40304 CCTCGCCCAGGACCGACCCACACGCCGTTCTCCTTGGCCCAGCCGATGAAGTCGGCGACG 40363 || || || || || ||| | | | | |||||| ||| ||||| || || Sbjct 215018 CCGCGTCCGGGCCCAACCGGGATGGAACTTTGCTTGGCGTAGCGAATGAAATCCCAAACC 215077 Query 40364 ACCAGGAAGTAGGACGGGAAGCCCATCTGGATGATCA 40400 || ||||||||| || ||||||||| | |||||| Sbjct 215078 ACGAGGAAGTAGCCGGGAAAGCCCATCCCGTTGATCA 215114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160404260880402