Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kappaphycus_20alvarezii_20[genbank_20GCA_5F002205965.1_202017-06-23] 1,123 sequences; 349,495,466 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq184 125 2e-24 >seq184 Length=375247 Score = 125 bits (138), Expect = 2e-24 Identities = 196/278 (71%), Gaps = 2/278 (1%) Strand=Plus/Plus Query 39031 CCGTACTTCTCGGTGACGTACCGGATCACGTCGCCACGGCGACGGTCATCGAAGTCGATG 39090 |||||||| |||| ||| || |||||| ||||| || ||| | | |||||| ||| Sbjct 214838 CCGTACTTTTCGGAGACATAGTCGATCACCTCGCCGCGTCGATCTTGACAGAAGTCAATG 214897 Query 39091 TCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGA 39150 || | ||||||||| ||||| || || || |||| || || |||||||| | | | | Sbjct 214898 TCAAAGTCGGGCATCGAGACCCGATCGGGATTCAAAAAACGTTCGAAGATCAACTCATTG 214957 Query 39151 GGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAGAG 39210 |||||||| || ||||||||||| | ||| ||||| | || || || || | || Sbjct 214958 GGGATGGGATCGAGGTCGGTGATGCGCAGGCTAAACGCGACGAGAGATCCCGCACCGGAT 215017 Query 39211 CCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTCGCCCAGCCGATGAAGTCGGCGACG 39270 ||||| || || || ||| | | | | ||| || ||| ||||| || || Sbjct 215018 CCGCGTCCGGGCCCAACCGGGATGGAACTTTGCTTGGCGTAGCGAATGAAATCCCAAACC 215077 Query 39271 ACGAGGAAGTACGACGGG-AACCCCATCTGGTTGATCA 39307 ||||||||||| | |||| || |||||| |||||||| Sbjct 215078 ACGAGGAAGTA-GCCGGGAAAGCCCATCCCGTTGATCA 215114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159713070097986